Cellvibrio sp. PSBB006: CBR65_12700
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Entry
CBR65_12700 CDS
T04891
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell00300
Lysine biosynthesis
cell00470
D-Amino acid metabolism
cell01100
Metabolic pathways
cell01110
Biosynthesis of secondary metabolites
cell01120
Microbial metabolism in diverse environments
cell01230
Biosynthesis of amino acids
Module
cell_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CBR65_12700
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CBR65_12700
Enzymes [BR:
cell01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CBR65_12700
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARU28216
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Position
3055819..3057066
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AA seq
415 aa
AA seq
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MQHFQPRNGELHVEDVPLSAVAERFGTPTYVYSRAAFTQHYLSYAQALGDHPGMVCYAIK
ANSNLAILNLLAKLGAGFDIVSGGELERVLRAGGDPARIVFSGVGKTPEEMARALDVGIF
CFNVESEAELEILARVAADKGMVANISLRVNPDVDANTHPYISTGLKENKFGIDIQRAPA
VYRRAAELPSLKIKGLDCHIGSQLTQLTPFLDALDRLLLLVDELESAGITISHLDLGGGL
GVTYRNETPPPVADYMAAIKQRLGDRKLSLMFEPGRSISANAGVLLTKVMYLKPTEHKNF
AIIDAAMNDNIRPSLYQAWQDIRPVKPRASGTKTWDLVGPICETGDFLGKDRELAIEPGD
LLAVMSTGAYGFSMSSNYNTRGRAAEVIVDGDQMFVVRERETIDDMLRGETLLPA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcagcattttcaaccacgcaacggcgaactccacgtcgaagatgtgcccctgagcgcc
gttgccgaacgtttcggcaccccgacctatgtctatagccgcgccgcttttacccagcat
tacctgtcttatgcccaagcccttggggatcatccgggcatggtgtgttacgccatcaaa
gccaactccaacctcgccattctgaacctgctggccaagctcggcgccgggttcgatatc
gtctccggtggggagcttgagcgcgtgttgcgcgcgggcggcgatccggcgcgcattgta
ttttccggcgtgggcaaaaccccggaagagatggcccgggcgctggatgtcggcatcttc
tgtttcaacgtggaatccgaagccgagctggagatccttgcccgcgtcgcggcagacaaa
ggcatggtggccaatatctccctgcgggtgaacccggatgtagacgccaacacccacccc
tatatctccaccggcctgaaagaaaacaaattcggcatcgacatccaacgcgcgccggcg
gtctatcgtcgcgccgccgaattgccgagcctgaagatcaaagggctggactgccatatc
ggctcccagctcacgcaactgacgcccttcctcgacgcgctggatcgcttgctgctgctg
gttgatgagctggaaagtgcaggcataacgatttcccacctggatctgggtggcggcttg
ggcgtgacctatcgcaatgaaacgccgccgccggtggctgactatatggccgctattaaa
cagcgtctgggcgaccgtaaactgagcctgatgtttgaaccgggtcgttcgatttccgcc
aatgccggtgtcttgctgaccaaggtcatgtatttaaagcccacggaacacaagaatttt
gcgatcatcgatgccgccatgaatgacaatatccgcccctcgctctaccaggcgtggcaa
gatattcgtccggtcaagccgcgcgcaagcggtacaaaaacctgggatctggtaggcccg
atttgcgagaccggcgactttctcggcaaagaccgcgaactcgccatcgaacccggtgat
ttgctcgcggtcatgtccaccggcgcctatggtttcagtatgagttccaactacaacacc
cgtggccgcgccgctgaggtgattgtcgacggcgaccagatgtttgttgtgcgcgagcgt
gaaacgatcgacgatatgctgcgcggtgaaacgcttttacccgcttga
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