Cellvibrio sp. PSBB006: CBR65_13460
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Entry
CBR65_13460 CDS
T04891
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell00040
Pentose and glucuronate interconversions
cell01100
Metabolic pathways
cell02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CBR65_13460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBR65_13460
Enzymes [BR:
cell01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CBR65_13460
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
3keto-disac_hyd
Big_5
Big_2
Glyco_hydro_59_C
DUF7800
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ARU28360
UniProt:
A0A1Y0FY61
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All DBs
Position
complement(3266370..3270482)
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AA seq
1370 aa
AA seq
DB search
MKILTSLFIITALGLSACGGSDDEPDQQSSSSAATSSINNSASNSSQSSANESSSSSTSS
FAAGTYTQWQEIDTAFPGAEGFGKKASGGRGGDIYYVTNLSDNNEPGSLRYAINQTGPRI
ILFKVSGYIDLSSNLDIANGDVSILGQTAPGDGITLRGGSLRIRSGVENVVIRFIRSRLG
AIENEADAFEGRYLNNIIVDHSSFSWAIDETTSFYANNNVTFQWSVISESLNDAGHGKGE
HGYGSNWGGVNASFHHNVMAHHKSRAPRIDGILDKWSDHKDIPNVDGVADLRNNIFYNHA
TFPPYGAEGRSVQFINNYYKPGPATTADNVKNFIFLASGRRPMYEEDRLYTLSDYNAMAA
AGTLDPKFLVNGSPAKPVGRVFVNGNYLEGNAEVTANNVLGVRYDDESLKDNIIQAEAFS
VVQGEVTTQSAAEVFDWVLAGAGASLKRDDVDERVLYTVRHGIASVGNGIINRPEDVGGY
PVLNSSAPPMDSDSDGMPDAWETANGLDPQDANDAWEIFQDLQQQYPEAKGWYTNAEVYW
YSLVKHVPGAGFSNDPDEYDWSTSSSSSYQHSSFSSPASSVSSSVSSSASSSSAPVVGCP
DTGEYFCDDFSSGLTNSWTQIAQAGNPVGANGDFAITNDGDAAYLSYTSGSTGGVLLLSD
PAALGDVEGDDYYVEARLRITKIGGNKQLYLLARYQDEDNWYGAGLNVQSSPSGSRVAVD
KNVGGVRGENFLPRHNLSLYPNTWYTVRFTLKGDALTVYLDGIPVITGSDSSLSGRGQVG
LFTHNFSFDVDYIRVGDADDIPLQPSQLTLSPEATTWNAEANDDPYEVTVTAINPNGAAD
TFTVESDNTAVVNVSVVENVATLTPLSEGTATITFTSGSDPSLTRTISAIIAPEFVQPVA
TYDLSAASAFPAAAETDTPVDTFLRLTFDSPPALGTGSIRIFNGNDNTLVDTIKLEGESD
SIGVDPSRLRTVNTNPVRIDGNSVTINLHNNRLAYNTPYYVAITAGVFTGATLAGETFEG
IGKTTGWQFTTRAAAPTENAVVVDDDGPADFRTLQGALNYVMDNIGKDDPASITLKNGVY
EELLFLRDKNQLTIQGESREGVVIQYRNNDKLNPGAGGSGIAGGANGGRSVFLIEAVDLL
TLENLTIKNTTLIGEGGQAETMYFNSGGRLIAKQINLISEQDTLLVKGYNWFYQSLIAGN
VDFIWGGNNVSLFEESEIRSLGDSRGNGGGGYILQARTANITDKGFVFLNSRLTRGPGPL
GHTIPDGETWLARSGGSSSYYDNIAFINTRIDSHIQPAGWNGSKTPNPAIASATAGWRQY
NIMNLNGEPVDISAWTLGYTLTETEYLNEFADREKIFSAYNGGEGWNPQP
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactaaccagtctattcatcatcaccgcactcggcctcagcgcctgtggcggt
tccgatgatgaacccgatcaacaatccagcagcagtgctgcaaccagttcaatcaacaac
tctgccagcaacagcagccaatcttctgctaatgagagctcctccagcagcacgtcatca
ttcgctgccggaacttatacgcaatggcaagaaatcgacaccgcatttcctggtgcagaa
ggcttcggtaaaaaagccagcggtggaaggggtggtgatatttattatgtgaccaacctg
tccgataacaacgagccggggagtttgcggtatgcgattaaccaaaccgggccgcggatt
attttgttcaaggtcagtggttatatcgacttgagtagcaacctcgatattgcgaatggt
gatgtgtctattcttggccagacagcgccgggggatggtattacgttgcgcggtggcagt
ttgcggattcggtcgggcgtggagaatgtagtgattcggtttattcgctcacgtctcggc
gcgattgaaaatgaggccgatgcgtttgaaggccgttatctgaataacatcattgttgat
cacagcagcttttcctgggccattgatgaaaccacgtcgttttatgccaacaacaatgta
acctttcaatggagtgtgatcagtgaaagtttgaacgatgcgggtcacggcaagggtgag
cacggctacggttccaactggggtggagtgaatgcgagttttcaccataatgtgatggct
caccataaaagtcgcgcgccgcgcattgatggcattctcgacaagtggagcgaccacaaa
gacattcccaatgtcgatggtgtagcggatttacgcaataatattttttataatcacgca
acctttccgccctatggcgcagaaggcagaagcgtgcagtttatcaataactattacaaa
cccggtccggctaccacggcggacaatgtgaaaaactttatcttcctcgccagtggtcgc
cgtcctatgtatgaagaggatcgcctgtacaccctgagcgattacaacgcgatggctgcg
gccggtacactcgatccaaaatttctggttaatggttcgcctgctaaaccggtgggtcgg
gtttttgtaaacggtaattacctggaaggtaacgcagaggtcactgccaacaatgtactg
ggtgtgcgttacgacgatgaaagtttgaaagacaacatcattcaggcggaagcattttct
gttgtgcagggtgaggtcaccacgcaatccgcagcggaggtatttgattgggtactggcg
ggtgccggcgcaagtttgaaacgcgatgacgttgacgagcgcgtcttgtacacggtgcgt
catggcattgccagtgtaggtaatggcatcatcaatcggcctgaggatgttggtggatat
ccggtgctgaacagcagcgcgccgcccatggattccgacagcgatggtatgccggatgcg
tgggaaacagccaacggccttgatccacaggatgcaaacgatgcgtgggaaatttttcag
gatttgcaacagcaatatcctgaagcgaagggttggtacaccaacgcagaagtttattgg
tacagtctggtcaaacacgtaccgggtgcgggtttttccaatgatcccgatgaatatgat
tggtctacttccagcagttcgtcttatcaacattcttccttcagttcaccggctagcagt
gtcagttcatcggtaagcagcagtgcgtcgtcatccagtgcaccggtggtgggttgcccg
gatactggcgaatatttttgcgatgacttttccagtggcttgaccaatagctggacgcaa
atagcgcaagccggaaatccggtcggtgccaacggtgactttgccattaccaacgacggc
gacgcggcgtatttgagttacacctcgggcagtacaggcggcgttttattgttgagcgac
ccggcagctttgggtgatgtggaaggcgatgattactatgtggaagcgcgcttgcgtata
accaagattggtggcaacaaacaattgtatttgctcgcccgttatcaggacgaagataac
tggtacggtgccggcttgaatgtacaaagttcgccttcgggcagtcgcgtggctgtggat
aaaaatgtgggcggtgtacgtggcgaaaatttcctgccgcgtcataacctatcactgtat
ccaaatacctggtacacggtgcgctttacgctcaaaggtgatgcgttaaccgtttatctc
gatggcattccggttattacaggtagcgatagcagtttatctggacgtgggcaagtcgga
ttattcacccacaatttttcgtttgatgtggattatatacgcgtcggcgacgctgacgat
atcccgctgcaaccatcccagctgacactttcaccggaagcaaccacctggaatgccgaa
gccaatgatgatccttacgaagtgacggtgacggcgatcaatcccaatggtgctgcggat
acgtttacggttgagtcggataatacggcggtggtgaacgtgagtgttgttgagaatgta
gccacgctgacaccgctgagcgaaggcaccgcgacaatcacctttaccagtggttctgat
ccgagcttgacgcgtaccattagtgcgatcattgcaccggaatttgtgcagcccgtggcg
acttacgatttgtccgccgcatctgcatttcctgcggcggcagaaaccgacacaccggtg
gatactttcctgcgtctcacgtttgattcgccgcccgcgttaggcactggcagtattcgg
atctttaacggcaacgacaacacactggtagacaccatcaagctggaaggggaatccgac
agcattggtgtagaccccagccggttgcgcacggtaaacaccaacccggtgcgtatcgat
gggaatagcgtcacgattaacttgcataacaatcgcctcgcctacaacacgccttactat
gtagccattaccgccggcgtatttaccggtgcaacactcgcgggtgaaacctttgaaggc
atcgggaaaaccaccggctggcaatttacaacacgtgctgctgcgccgaccgaaaatgcg
gtagtggttgatgatgacggtccagccgacttccgcaccctgcaaggtgcattgaattat
gtgatggacaacattggcaaagatgatccggctagcatcacgctaaagaatggtgtgtat
gaagagctgctgttcctgcgcgataaaaatcaactcaccattcaaggcgaaagtcgtgaa
ggtgtcgtcattcaatatcgcaacaacgacaagttgaatcccggcgcgggtggcagtggt
atagcgggtggtgcaaatggtggacgcagcgtgttcctgatagaagccgttgatttgctt
acgctggaaaacctcaccatcaaaaacaccactttgatcggcgaaggcggacaagcggag
acgatgtatttcaacagcggcggccgcctgattgcaaaacagatcaaccttatcagcgaa
caggacaccttgttagtaaaaggatacaactggttttaccaatcgctgattgccggcaac
gtggattttatctggggcggcaacaatgtctcactgtttgaagaatcggaaatccggtcg
ctcggtgattcgcgcggtaacggcggcggtggttatattctgcaagcgcgcaccgccaac
atcaccgacaaaggttttgtatttcttaacagccgactcacacgcggccccggcccactc
ggacacacaatccccgacggcgaaacctggcttgcgcgcagtggtggcagcagcagttat
tacgacaacattgcatttatcaacacgcgcattgacagtcacatccagcctgccggctgg
aacggctccaaaacccccaacccggccattgcctcggcaactgccggttggcggcaatac
aacatcatgaatctcaatggtgaacccgtagatatctccgcctggactctgggctacacc
ctgacggaaacggagtacctgaacgagtttgccgaccgggagaaaattttctcggcgtat
aacggtggggaagggtggaacccacagccgtag
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