Cellvibrio sp. PSBB006: CBR65_13650
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Entry
CBR65_13650 CDS
T04891
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell00040
Pentose and glucuronate interconversions
cell01100
Metabolic pathways
cell02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CBR65_13650
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBR65_13650
Enzymes [BR:
cell01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CBR65_13650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ARU28397
UniProt:
A0A1Y0FYF3
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All DBs
Position
complement(3326311..3328365)
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AA seq
684 aa
AA seq
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MKITQLALLVAMGSTLAACGGGGSGGSSNDPSPTPSSSSTSSSNSVASSSAVVSSSSAIS
SSQNNSSAPASASSSSDANPNACEKINTVQGFASLNGGTTGGADTGAGNHVVVATTGAEI
SAALTNATYTDLPLTIYVDGQMTWENSNSAPIRVRRDNVSIIGRNAGEFYGVGIEVSHGA
SNVIIRNLKMHEVPQSRGSGDIISLNGQDGPVRNIWIDHNELYNSLVAPGCTTETCHKDY
HDELVSGRADVSDVTISYNYLHDSWKTSLWGSSDTGEEGDADRRITFHNNYWYKVNSRLP
LFRFGEAHIFNNYYHQVDGSGINSRMGAVMRIDGNYFDTVKNPIVSIDSAELGFWTVADN
VFENVTTSSGSCATDSPPCYNAHEISTIEGHTPAYEYELMAAADVKAHVSENAGAYKINA
CLGFDEISSSSSSASSSVMPEGPAAWNVYNADALPGTAGSVSLANGGSTEFSIGGGNSDY
AAFTLDSGVVHFDTSVGSIVHHASVNEVVNSDGTYPKYFTLLAGVTGNADALRGLEIEVA
MADAGETGSRVKMLIRPEQGGVQLEQANSGDSVASYQSPGTAIDMDVFRVYHLTIALTSD
TVGSVNVYAEGSETPMPNLSLSDVTMRPASGTGSNYVRIGDGGSSDYKSSIDWLIWSDEA
VYTPAQLKGLLPDGLGQITGYAAD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcacacagctcgctttattggttgccatgggcagtaccctggcagcttgcggt
ggcggcgggtccggcggctcgtctaacgatccgagtccgacaccgagcagcagttcgaca
tcatccagcaattcagttgcatccagtagcgcagttgtatctagcagctctgcaatatcc
agcagccagaacaactcatccgcgccggcaagtgcttcttcaagtagcgatgccaatccc
aacgcatgtgaaaaaatcaacaccgtccagggttttgcgtcattaaatggtggcaccacc
ggtggtgctgatacaggcgcaggcaatcacgttgttgtcgccacaaccggtgcagaaatt
tcagcagcgttaaccaatgccacttatacggatttacctttgaccatctatgtcgatggc
cagatgacctgggagaattccaacagcgcaccgattcgtgttcgtcgcgataacgtgtcg
atcatcggtcgcaatgcgggtgaattttacggcgtggggattgaagtcagtcacggcgcc
agcaacgtcattattcgcaacttaaagatgcacgaagttccgcaaagtcgtggttcgggt
gacatcatcagtttaaatggccaggatggtccggtgagaaatatctggatcgatcacaac
gagctttacaacagtttggtcgcgccgggttgtaccaccgaaacctgccataaagattat
cacgatgaactggtcagtggtcgcgccgatgtgagtgacgtaactatttcttacaactac
ctccacgatagctggaagacctctttgtggggctcgtcagataccggcgaagaaggcgat
gctgatcgccgcattaccttccataacaactactggtacaaagtgaattcgcgcttgcca
ttgttccgttttggcgaggcacatatcttcaacaattattatcatcaagttgacggttca
ggcattaactcgcgcatgggtgcggtcatgcgtatcgatggtaattattttgataccgtg
aaaaatccgattgtctctatcgacagtgctgagttgggtttctggacagtggcagacaat
gtgtttgaaaacgtcacgaccagcagtggtagttgtgcaactgattcaccgccttgttac
aacgctcacgaaatctccaccatcgaaggtcatacacccgcatatgaatatgagttgatg
gcagcagcagatgttaaagcgcatgtcagcgaaaatgccggcgcatataaaatcaatgcg
tgtctcggatttgatgagatcagcagttcttcatcttccgccagttcctcggtcatgccc
gaagggccagcggcgtggaatgtttacaacgcggatgccttgccgggaacagccggatcg
gtttcattagcaaacggtggttcaacggaattttcgattggtggtggaaacagtgattac
gctgcgtttaccctggactcgggcgttgtgcattttgatacgtcagtgggttccattgtg
catcacgccagtgtgaatgaggttgttaatagcgatggcacttatccaaaatatttcacg
ctgttagccggtgtaaccggcaatgcagatgcgctgcgtggtctagagattgaagtcgcc
atggccgatgccggtgaaaccggtagccgcgtaaaaatgttgattcgcccggaacaaggc
ggtgtgcaactggagcaagcgaacagcggtgattcagtagcgagctatcaaagtcccggc
acagctatcgacatggatgtgtttcgcgtttatcacctgacgattgcattaacatccgac
actgtcgggtcagtaaatgtttacgctgagggcagtgaaacgcccatgcccaacctgagc
ctgagcgatgtcaccatgcgtccggctagtggcaccggcagtaactatgtgcgtatcggt
gatggcggtagcagtgactacaaatccagtattgattggctgatctggagtgacgaagct
gtctacacaccggcacaactaaaaggattgttacccgacgggctcggtcagattaccggc
tatgcagctgactga
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