Cellvibrio sp. PSBB006: CBR65_14510
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Entry
CBR65_14510 CDS
T04891
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBR65_14510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cell03021
]
CBR65_14510
03019 Messenger RNA biogenesis [BR:
cell03019
]
CBR65_14510
Transcription machinery [BR:
cell03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CBR65_14510
Messenger RNA biogenesis [BR:
cell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CBR65_14510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
AAA_22
Mor
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARU28558
LinkDB
All DBs
Position
complement(3523173..3524432)
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AA seq
419 aa
AA seq
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MNLTDLKTKPVEELINIATEMGLESMARSRKQDIIFNILKRHAKGGEDIYGDGVLEILVD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEIN
FDKPESSRNKILFENLTPLFPNERLLLEAGNGSTEDLTGRIIDLIAPIGKGQRGLIVAPP
KAGKTIMMQNIAQAITRNNPECHLIVLLIDERPEEVTEMQRSVRGEVVASTFDEPPARHV
QVADMVIERAKRLVEHKKDVIILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLSIIATALVDTGSKMDEVIYEEFKGTGNLELHLDRKIAEKRIYPAINV
RRSGTRREELLMKEDELQRAWILRRLLNDMEDVAATEFLVDKLKDFKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttactgatctaaaaacaaaacctgtcgaagaactgattaacattgccaccgaa
atgggcctcgaaagtatggcccgctcacgcaagcaggatattatcttcaatatcctcaag
cgacatgccaaaggcggggaggatatttacggcgatggcgtgttggaaattctggtggat
ggttttggttttttacgttcagcagacagttcctacctcgcaggccccgatgatatttat
gtttcacccagccagattcgccgcttcaacctccgcaccggcgatacaatttccggcaag
attcgtcccccgaaagaaggtgaacgttattttgctctgttgaaagttaacgaaattaac
ttcgacaaacctgaaagttcacgcaacaaaatcctctttgaaaacctcacaccgctgttc
cccaacgagcgtttgttacttgaagccggcaacggttctaccgaagacctcaccggtcgt
atcatcgatttgattgcgccaattggtaaaggccaacgcggcttgatcgtagcgccaccc
aaagccggtaaaaccatcatgatgcaaaatattgcgcaggcgattacgcgcaataatcct
gagtgtcacctgattgttctgttgattgatgagcgtccggaagaagtgaccgagatgcag
cgttctgtgcgcggcgaagtggttgcatcaaccttcgatgagccacccgcacgtcacgta
caagttgcggacatggttattgagcgtgccaagcgcctcgtcgaacacaaaaaagatgtg
atcattctgctcgactctattacacgtctggcacgtgcatacaacaccgtcattccttct
tccggtaaagtgttgaccggtggtgtggatgcccatgcgctggagcgacccaagcgtttc
ttcggtgccgcgcgcaacatcgaagaaggcggcagcctgagcatcattgcaaccgcactg
gttgataccggctcgaagatggacgaagtgatttacgaagaatttaaaggtaccggtaac
ctggagttgcatctggatcgcaagattgccgaaaaacgtatttacccggccatcaacgtc
cgtcgttccggcacccgtcgcgaagagctgttgatgaaagaagatgaactgcaacgcgcc
tggattttgcgccgcttgttaaacgatatggaagatgtggcagcaacagaatttttggtc
gataagttgaaagacttcaaaaccaatgatgaattcttcctgtcgatgaaacgcaagtaa
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