Entry |
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Name |
|
KO |
|
Organism |
celn Cellulomonas sp. NTE-D12
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:celn00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELD12_05460
09124 Replication and repair
03420 Nucleotide excision repair
CELD12_05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:celn03021]
CELD12_05460
03400 DNA repair and recombination proteins [BR:celn03400]
CELD12_05460
Enzymes [BR:celn01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CELD12_05460
Transcription machinery [BR:celn03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CELD12_05460
DNA repair and recombination proteins [BR:celn03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CELD12_05460
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(585098..586753)
|
AA seq |
551 aa
MTDGPLIVQSDKTLLLEVDHDLADACRRAIAPFAELERAPEHVHTYRLTPLGLWNARAAG
HDAEQVIDTLLLYSRYPVPHALLVDVAETMSRYGRLQLVSDPVHGLVLHALDRAVLAEVM
RSKRTAGLFGARLDDTDVVVHASERGHLKQVLVKLGWPAEDLAGYVDGEKHDIGLLEEDW
SLRPYQKQAIDGFFHGGSGVVVLPCGAGKTLVGAGAMARSSTTTLILVTNTVSARQWRDE
LVARTTLTEDEIGEYSGSRKEIRPVTIATYQVLTTKRKGVYSHLELLDARDWGLIVYDEV
HLLPAPVFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRFDAPWKDIESQGYIAP
ALCTEVRLTLPDHERMTYATAEPEDKYRLAATAGGKNGVVDRIVRRHAGEQTLVIGQYLD
QLHELAEHLDAPLITGETTVRERQRLFGAFRTGELSTLVVSKVANFSIDLPEASVAIQVS
GSFGSRQEEAQRLGRIMRPKGDGRTAHFYAVVARDTVDQEFAAHRQRFLAEQGYSYTIVD
AEDLDQAPDPA |
NT seq |
1656 nt +upstreamnt +downstreamnt
gtgaccgacggccccctgatcgtgcagagcgacaagacgctgctgctcgaggtcgaccac
gacctcgccgacgcctgccgtcgggccatcgccccgttcgcggagctggagcgcgccccg
gagcacgtgcacacctaccggctgacgccgctgggcctgtggaacgcgcgcgccgcgggc
cacgacgccgagcaggtgatcgacaccctgctgctgtacagccgctacccggtgccgcac
gcgctgctggtcgacgtcgccgagacgatgtcccgctacgggcggctgcagctggtgtcc
gacccggtgcacggcctggtgctgcacgccctggaccgggcggtgctggcggaggtgatg
cggtccaagcggaccgccggcctgttcggcgcccgcctggacgacaccgacgtggtggtg
cacgcctccgagcgcgggcacctcaagcaggtgctggtgaagctgggctggccggcggag
gacctggcgggctacgtcgacggcgagaagcacgacatcgggctgctcgaggaggactgg
tcgctgcggccgtaccagaagcaggcgatcgacggcttcttccacggcgggtccggcgtg
gtggtgctgccctgcggcgccggcaagacgctggtcggcgcgggtgcgatggcccgctcc
tcgacgacgacgctgatcctggtgaccaacaccgtcagcgcccggcagtggcgcgacgag
ctggtggcacggaccacgctgaccgaggacgagatcggcgagtactccggctcccggaag
gagatccggcccgtcaccatcgcgacctatcaggtgctgaccaccaagcggaagggcgtc
tacagccacctcgagctgctggacgcccgcgactggggcctgatcgtctacgacgaggtg
cacctgctcccggcgccggtgttccgcatgaccgcggacctgcaggctcgtcgccgcctc
ggcctgaccgccaccctggtgcgcgaggacggccgcgaggacgaggtgttctccctgatc
ggccccaagcggttcgacgcgccgtggaaggacatcgagtcccaggggtacatcgccccg
gccctctgcacggaggtccggctgaccctccccgaccacgagcggatgacgtacgccacg
gccgagccggaggacaagtaccgcctcgcggcgaccgccggtggcaagaacggcgtcgtc
gaccgcatcgtgcgccggcacgcgggtgagcagacgctcgtcatcggccagtacctggac
cagctgcacgagctggccgagcacctggacgccccgctgatcaccggcgagacgaccgtc
cgcgagcgccagcggctgttcggcgccttccgcaccggcgagctgtccacgctcgtcgtg
agcaaggtggccaacttctccatcgacctgccggaggcgtccgtcgccatccaggtgtcg
gggtcgttcggctcccgccaggaggaggcccagcgcctcggccggatcatgcggccgaag
ggggacgggcgcactgcgcacttctacgcggtcgtagcgcgggacacggtggaccaggag
ttcgccgcgcaccggcagcggttcctggcggagcagggctactcctacacgatcgtcgac
gccgaggacctggaccaggcgcccgacccggcctga |