Cellulomonas sp. NTE-D12: CELD12_05460
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Entry
CELD12_05460 CDS
T10634
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
celn Cellulomonas sp. NTE-D12
Pathway
celn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
celn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELD12_05460
09124 Replication and repair
03420 Nucleotide excision repair
CELD12_05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celn03021
]
CELD12_05460
03400 DNA repair and recombination proteins [BR:
celn03400
]
CELD12_05460
Enzymes [BR:
celn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CELD12_05460
Transcription machinery [BR:
celn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CELD12_05460
DNA repair and recombination proteins [BR:
celn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CELD12_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDO41056
LinkDB
All DBs
Position
complement(585098..586753)
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AA seq
551 aa
AA seq
DB search
MTDGPLIVQSDKTLLLEVDHDLADACRRAIAPFAELERAPEHVHTYRLTPLGLWNARAAG
HDAEQVIDTLLLYSRYPVPHALLVDVAETMSRYGRLQLVSDPVHGLVLHALDRAVLAEVM
RSKRTAGLFGARLDDTDVVVHASERGHLKQVLVKLGWPAEDLAGYVDGEKHDIGLLEEDW
SLRPYQKQAIDGFFHGGSGVVVLPCGAGKTLVGAGAMARSSTTTLILVTNTVSARQWRDE
LVARTTLTEDEIGEYSGSRKEIRPVTIATYQVLTTKRKGVYSHLELLDARDWGLIVYDEV
HLLPAPVFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRFDAPWKDIESQGYIAP
ALCTEVRLTLPDHERMTYATAEPEDKYRLAATAGGKNGVVDRIVRRHAGEQTLVIGQYLD
QLHELAEHLDAPLITGETTVRERQRLFGAFRTGELSTLVVSKVANFSIDLPEASVAIQVS
GSFGSRQEEAQRLGRIMRPKGDGRTAHFYAVVARDTVDQEFAAHRQRFLAEQGYSYTIVD
AEDLDQAPDPA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggccccctgatcgtgcagagcgacaagacgctgctgctcgaggtcgaccac
gacctcgccgacgcctgccgtcgggccatcgccccgttcgcggagctggagcgcgccccg
gagcacgtgcacacctaccggctgacgccgctgggcctgtggaacgcgcgcgccgcgggc
cacgacgccgagcaggtgatcgacaccctgctgctgtacagccgctacccggtgccgcac
gcgctgctggtcgacgtcgccgagacgatgtcccgctacgggcggctgcagctggtgtcc
gacccggtgcacggcctggtgctgcacgccctggaccgggcggtgctggcggaggtgatg
cggtccaagcggaccgccggcctgttcggcgcccgcctggacgacaccgacgtggtggtg
cacgcctccgagcgcgggcacctcaagcaggtgctggtgaagctgggctggccggcggag
gacctggcgggctacgtcgacggcgagaagcacgacatcgggctgctcgaggaggactgg
tcgctgcggccgtaccagaagcaggcgatcgacggcttcttccacggcgggtccggcgtg
gtggtgctgccctgcggcgccggcaagacgctggtcggcgcgggtgcgatggcccgctcc
tcgacgacgacgctgatcctggtgaccaacaccgtcagcgcccggcagtggcgcgacgag
ctggtggcacggaccacgctgaccgaggacgagatcggcgagtactccggctcccggaag
gagatccggcccgtcaccatcgcgacctatcaggtgctgaccaccaagcggaagggcgtc
tacagccacctcgagctgctggacgcccgcgactggggcctgatcgtctacgacgaggtg
cacctgctcccggcgccggtgttccgcatgaccgcggacctgcaggctcgtcgccgcctc
ggcctgaccgccaccctggtgcgcgaggacggccgcgaggacgaggtgttctccctgatc
ggccccaagcggttcgacgcgccgtggaaggacatcgagtcccaggggtacatcgccccg
gccctctgcacggaggtccggctgaccctccccgaccacgagcggatgacgtacgccacg
gccgagccggaggacaagtaccgcctcgcggcgaccgccggtggcaagaacggcgtcgtc
gaccgcatcgtgcgccggcacgcgggtgagcagacgctcgtcatcggccagtacctggac
cagctgcacgagctggccgagcacctggacgccccgctgatcaccggcgagacgaccgtc
cgcgagcgccagcggctgttcggcgccttccgcaccggcgagctgtccacgctcgtcgtg
agcaaggtggccaacttctccatcgacctgccggaggcgtccgtcgccatccaggtgtcg
gggtcgttcggctcccgccaggaggaggcccagcgcctcggccggatcatgcggccgaag
ggggacgggcgcactgcgcacttctacgcggtcgtagcgcgggacacggtggaccaggag
ttcgccgcgcaccggcagcggttcctggcggagcagggctactcctacacgatcgtcgac
gccgaggacctggaccaggcgcccgacccggcctga
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