Cellulomonas sp. NTE-D12: CELD12_12550
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Entry
CELD12_12550 CDS
T10634
Symbol
topA_1
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
celn Cellulomonas sp. NTE-D12
Brite
KEGG Orthology (KO) [BR:
celn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
celn03032
]
CELD12_12550 (topA_1)
03400 DNA repair and recombination proteins [BR:
celn03400
]
CELD12_12550 (topA_1)
Enzymes [BR:
celn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CELD12_12550 (topA_1)
DNA replication proteins [BR:
celn03032
]
Prokaryotic type
DNA Topoisomerases
CELD12_12550 (topA_1)
DNA repair and recombination proteins [BR:
celn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CELD12_12550 (topA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF6292
Motif
Other DBs
NCBI-ProteinID:
BDO41765
LinkDB
All DBs
Position
complement(1356712..1357713)
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AA seq
333 aa
AA seq
DB search
MTLPAMVRLRRARLDAPGWTRRRAGRGFVYLDEAGRRIDDPEVRAAIAALAIPPAWHDVW
ICPWPNGHVQATGVDAAGRRQYLYHPQWRRRRDRLKHDHVLEVARRLPAARRAVRADVRL
DGMPRQKALALAFLLLDLAYLRVGGEGYAATNGSFGLATLRREHVRVHADDTVHLTFPAK
SGQVRDTLVDDAEVAAGVRMLVRRHDDNPELLAWRDEAGWHDVTSSDVAAYVRERLGGEA
TPKDFRTWHATVLAARALAIAGPAPASDRARRRAVTQAVRDVAAELGNTPAVCRASYVDP
RVIDLWERGEHIGPVRTQAGAERATLALLETSP
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgacactgcctgccatggttcgtctgcgccgcgcccgtctggacgccccgggctggacg
cggcgccgggccggccgcggcttcgtctacctcgacgaggccgggcgccgcatcgacgac
cccgaggtacgggccgcgatcgccgccctcgccatcccgcccgcgtggcacgacgtgtgg
atctgcccgtggcccaacggtcacgtgcaggcgacgggggtggacgccgcggggcgccgc
cagtacctgtaccacccgcagtggcgccgccggcgcgaccggctcaagcacgaccacgtg
ctcgaggtggcccgccgcctgcctgccgcgcgccgggccgtccgtgccgacgtgcggctc
gacgggatgccgaggcagaaggccctcgcgctggcgttcctgctgctcgacctggcgtac
ctgcgcgtcggcggcgagggctacgcggccaccaacggctcgttcgggctcgcgacgctg
cggcgcgagcacgtgcgggtgcatgcggacgacacggtgcacctcaccttccccgccaag
tccggccaggtgcgggacacgctggtggacgacgccgaggtggcggcgggcgtgcgcatg
ctggtgcggcggcacgacgacaaccccgagctgctcgcctggcgcgacgaggccggctgg
cacgacgtgacgagctccgacgtggcggcctacgtgcgggagcggctcggcggcgaggcg
acgccgaaggacttccggacctggcacgcgacggtgctcgcggcgcgcgcactggcgatt
gcaggcccggcacccgcgtcggaccgcgcccgtcgacgtgccgtcacccaggccgtgcgc
gacgtcgccgcggagctgggcaacacccccgccgtctgccgggcgtcctacgtcgacccg
cgggtgatcgacctgtgggagcgcggcgagcacatcgggcccgtccggacgcaggcgggt
gccgagagggccaccctggcgctgctcgagacgtcgccgtga
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