Cellulomonas sp. NTE-D12: CELD12_18900
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Entry
CELD12_18900 CDS
T10634
Name
(GenBank) DNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
celn Cellulomonas sp. NTE-D12
Pathway
celn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
celn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CELD12_18900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
celn03019
]
CELD12_18900
03009 Ribosome biogenesis [BR:
celn03009
]
CELD12_18900
Enzymes [BR:
celn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CELD12_18900
Messenger RNA biogenesis [BR:
celn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CELD12_18900
Ribosome biogenesis [BR:
celn03009
]
Prokaryotic type
rRNA helicases
CELD12_18900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
adh_short
Ser_hydrolase
Motif
Other DBs
NCBI-ProteinID:
BDO42400
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All DBs
Position
2046774..2048573
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AA seq
599 aa
AA seq
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MPASGSEPAEAPATPVPAVATSTFDDLDLPAPLRRAVADLGFATPSAVQAATIPALLAGR
DLVGVAQTGTGKTAAFGLPLLAAIDPELRAVQAVVLTPTRELALQVAEAIESFAQHLPGV
GVVAVYGGAPYLPQQRALARGAQVVVGTPGRVLDHLERRTLVLDELRFLVLDEADEMLRM
GFAEDVDRVLSSAPERRQMALFSATMPPAIRRVAEQHLVDPAQVTVSRQSSTVTTVRQTY
AVVPFRHKTGALARVLAVSDADASIVFVRTREAAEQVGSALVERGVSAAYISGDVAQGDR
EKIVDRLRSGALDVLVATDVAARGLDVDRIGLVVNFDVPREPEAYVHRIGRTGRAGRAGE
ALTFVTPAEQGKLRQIERTTRVQLEQIQIPTPAQVSAHRVTSLLARADERAALGRLEAYQ
EAIAAHVAERPGTDLVQLLAVVAALAVGDEGPAPRPELGDDLDDALSRARLTDAPERHGS
QHTSDGGRRRTDTRRADGSTRYRVAVGHRDGVQPNALVGALTNEGGLTGKDLGKIDIFGS
FSLVDIPAGLTPEVVERLSRTRVAGRPLRIRLDSGPRDSGPRAPHGPSRPAGHVHAARH
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcctccgggtccgagcccgccgaggcgccggccaccccggtgccggctgtcgcg
acgtcgacgttcgacgacctcgacctccccgcgccgctgcgccgcgcggtcgcggacctg
ggcttcgccaccccgtcggccgtccaggccgcgacgatccccgccctgctggccggccgc
gacctggtcggcgtcgcccagacgggcaccggcaagacggcggccttcgggctccccctg
ctcgccgcgatcgacccggagctgcgggccgtccaggccgtcgtgctgaccccgacccgc
gagctcgcgctgcaggtggccgaggcgatcgagtcgttcgcccagcacctgccgggcgtc
ggcgtggtggccgtgtacggcggtgctccgtacctgccgcagcagcgcgcgctcgcgcgc
ggcgcccaggtggtggtcggcacgcccggtcgcgtcctggaccacctggagcggcggacg
ctggtgctggacgagctgcgcttcctggtgctcgacgaggccgacgagatgctgcgtatg
ggcttcgccgaggacgtcgaccgcgtgctcagctccgcgccggagcgccgtcagatggct
ctgttctccgccacgatgccaccggcgatccgtcgggtcgccgagcagcacctggtcgac
ccggcgcaggtcaccgtgtcccgccagtcgtcgaccgtcacgacggtccgccagacgtac
gccgtggtgccgttccggcacaagacgggtgcgctggcccgggtgctcgcggtgtccgac
gcggacgcgagcatcgtcttcgtccgcacgcgtgaggccgccgagcaggtgggctcggcg
ctggtggagcgcggcgtctccgccgcgtacatctccggcgacgtggcgcagggcgatcgg
gagaagatcgtcgaccggctgcgctcgggggcactcgacgtgctggtggccaccgacgtc
gccgcccgtgggctcgacgtggaccgcatcggcctcgtggtgaacttcgacgtgccccgc
gagccggaggcctatgtgcaccgcatcgggcggaccggacgggccggccgcgcaggcgag
gcgctcaccttcgtcacacccgccgagcagggcaagctgcgccagatcgagcgcaccacc
cgcgtgcagctcgagcagatccagatcccgacgccggcgcaggtgtccgcccaccgggtg
accagcctgctggctcgcgccgacgagcgggcggcgctcggccggctcgaggcgtaccag
gaggccatcgcggcccatgtcgccgagcggccgggcaccgacctggtgcagctgctcgcc
gtggtcgccgcgctcgcggtcggcgacgaggggccggcgcctcgccccgagctcggtgac
gacctcgacgacgcgctcagccgcgcgcggctgaccgacgcacccgagcggcacggttcg
cagcacacgtccgacggaggtcgccggcgcacggacacccgtcgcgcggacggcagcacc
cgctaccgcgtggccgtcggccaccgcgacggcgtgcagccgaacgccctggtcggggcc
ctgacgaacgagggcgggctgaccggcaaggacctcggcaagatcgacatcttcgggtcg
ttctcgctcgtggacatcccggccggcctcacgcccgaggtggtggagcggctgagccgg
acgcgggtggccggacggccgctgcgcatccggctggacagcggacctcgcgacagcgga
ccgcgggccccgcacggaccgagccgtcccgccgggcacgtgcacgccgcccggcactga
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