KEGG   Cellulomonas sp. NTE-D12: CELD12_20900
Entry
CELD12_20900      CDS       T10634                                 
Symbol
rnj
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
celn  Cellulomonas sp. NTE-D12
Pathway
celn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:celn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CELD12_20900 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:celn03019]
    CELD12_20900 (rnj)
Messenger RNA biogenesis [BR:celn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CELD12_20900 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: BDO42600
LinkDB
Position
complement(2276766..2278451)
AA seq 561 aa
MSHPHPELTLPPALAAGALRIVPLGGLGEVGRNMSVLEFDGRLLVIDCGVLFPEDNQPGV
DLILPDFDYIRDRLDDIEAIVLTHGHEDHIGAVPYLLRLRQDIPLVGSQLTLAFVEAKLK
EHRITPLTLPVREGQTEQLGVFECEFVAVNHSIPDALAVAVRTPAGTVLNTGDFKMDQLP
LDGRITDLRAFARLGEQGVDLFMVDSTNAEVPGFVTGEREIGPVLDRVFAESTRRIIVAS
FASHVHRVQQVLDAAAMHERRVALVGRSMVRNMTIAAELGYLHVPEGVLVDQKQVDDLPD
DQVVFMCTGSQGEPMAALSRIANGDHRISVGPGDTVILASSLIPGNENAVFRVINGLTRL
GARVVHSGNAKVHVSGHASAGELLYVYNVLRPRNVMPIHGEVRHLVANAALAVRTGVPAD
RVVLAEDGVVVDLVDGRASVAGAVPCGYVYVDGSSVGGITEAELKDRRILGDEGFVSIFA
VVSSADGKVLAGPQIHARGVAEQDSVFDAVLPELSAALEEAARSSSVDTYQLQQVVRRVV
GRFVASRLRRRPMIIPVVVEA
NT seq 1686 nt   +upstreamnt  +downstreamnt
gtgagccacccccaccccgaactcaccctgcccccggccctggcggccggcgcgctgcgc
atcgtcccgctcggcggcctcggtgaggtgggccgcaacatgtcggtcctcgagttcgac
ggtcgcctgctggtgatcgactgcggcgtgctgttccccgaggacaaccagcccggcgtc
gacctgatcctcccggacttcgactacatccgggaccggctggacgacatcgaggcgatc
gtgctcacgcacggtcacgaggaccacatcggcgcggtgccctacctgttgcggctgcgc
caagacatccctctggtcggctcccagctgacgctggccttcgtcgaggccaagctcaag
gagcaccggatcacgccgctgaccctgcccgtgcgcgaggggcagaccgagcagctcggc
gtcttcgagtgcgagttcgtcgcggtcaaccactcgatcccggacgcgctggcggtggct
gtgcgcacgcccgcgggcaccgtgctcaacaccggcgacttcaagatggaccagctcccg
ctggacggacggatcaccgacctgcgcgccttcgctcggctcggtgagcagggcgtcgac
ctgttcatggtcgactcgaccaacgccgaggtacccgggttcgtgacgggcgagcgcgag
atcggccccgtgctggaccgggtgttcgccgagtcgacccgccggatcatcgtcgcgtcg
ttcgcctcgcacgtgcaccgcgtccagcaggtgctcgacgctgccgcgatgcacgagcgc
cgggtcgccctcgtggggcgctcgatggtccggaacatgacgatcgcggccgagctgggc
tacctgcacgtcccggagggggtgctggtcgaccagaagcaggtcgacgacctgccggac
gaccaggtcgtcttcatgtgcaccgggtcccagggcgaaccgatggcggcgctgtcgcgc
atcgcgaacggcgaccaccgcatcagcgtcggccccggcgacacggtgatcctggcctcg
agcctgatccccgggaacgagaacgccgtgttccgcgtcatcaacggcctgacccggctc
ggtgcgcgcgtcgtgcactccggcaacgccaaggtgcacgtctccgggcacgccagcgcc
ggtgagctgctctacgtctacaacgtcctgcggccgcgcaacgtgatgccgatccacggc
gaggtgcggcacctcgtcgcgaacgccgcgctggccgtccgcaccggcgtccccgccgac
cgcgtggtcctggcggaggacggcgtggtggtcgacctggtcgacgggcgcgcctccgtg
gccggtgccgtgccgtgcggctacgtctacgtcgacggctcgagcgtgggcggcatcacc
gaggccgagctgaaggaccgccggatcctgggcgacgagggcttcgtgtccatcttcgcc
gtcgtcagctcggcggacggcaaggtgctcgccgggccgcagatccacgcgcgcggtgtc
gccgagcaggactccgtgttcgacgccgtgctgccggagctgtccgcggcactggaggag
gcggccaggtcgagctcggtcgacacgtaccagctgcagcaggtggtgcgccgggtggtc
ggtcggttcgtggcgagccgtctgcggcgccggccgatgatcatcccggtggtcgtcgag
gcctga

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