Cellulomonas sp. NTE-D12: CELD12_25730
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Entry
CELD12_25730 CDS
T10634
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
celn Cellulomonas sp. NTE-D12
Pathway
celn03420
Nucleotide excision repair
celn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
celn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CELD12_25730
03430 Mismatch repair
CELD12_25730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
celn03400
]
CELD12_25730
Enzymes [BR:
celn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CELD12_25730
DNA repair and recombination proteins [BR:
celn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CELD12_25730
MMR (mismatch excision repair)
Other MMR factors
CELD12_25730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
BDO43083
LinkDB
All DBs
Position
complement(2787166..2790471)
Genome browser
AA seq
1101 aa
AA seq
DB search
MSVLSAVQIAALLNKEPPTPEQQRVIESPLRPALVVAGAGSGKTETMAARVVWLLANGLA
APEQVLGLTFTRKAAGELEDRVRRRLRALVRSARSARLELPGAELLGLHDPDDPLGALSR
PTVSTYHAYAAGLVGEHALRLGLEPGARLLGEAAQWQLAADVVESWSGDLDTDKATSTVV
DAVLELSGALDEHLVTVADARRGIERIVDSLTSTPAGDPPRPLKQELRTLIGSLQERLRL
LDVVAAYRDRKRAGDVIDFGDQVALAARLAAEVPAVASAERDRYRVVLLDEYQDTSHAQL
ELLRALFGDGHPVMAVGDPHQSIYGWRGASAGGLERFPTSFPVVDDGGRRPADVHQLSTS
WRNDRAILDAANLVAGPLRAAAAARAHPVEVPVLGARPGAGPGHVAALMCATVEEEASAV
ARFVAERWRPASQDGHRVTAAVLCRKRSQFEALAPALRAAGLPVEVVGLGGLLSTPEVVD
LVAALQAAHDPSRGDALMRLLTGARTRLGAADLHALAAWARELAARGPGRSRSTDDGSRE
HDVVDERSIVDALDDLPAPGWRSHDGRVLTDVGRARLARLATVLRDVRRHTYLPLPELVA
ETERLLGLDIEVASRPGVGPARARLHLDSFAQVAGEFARSAELPTLGGFLAWLEAADARE
DGLELPVSEPDPDAVQLITVHAAKGLEWDVVAVPGLVDGVLPVLASGADGPTSSGWLTGL
GTLPYPLRGDRDDLPAFRYAGAASPQDLDRRRLEFRLDAGRHELAEERRLAYVALTRART
DLLLTGAWWGTATRPRAVSPFLAELLEAGAVSEAGWEAPPEVGAANPRDDVVATTQWPGD
PFGDDGRRRAALEEAAGAVRAAAQGAGGPDGAGTAWDVLADRLLAERSAAREPDGPVELP
SHLSASALVRLDADATGFAAELRRPVPSAPAPQARRGTAFHAWVEGWFGAASLVDLDALP
GADDDSVAVDADLSALRAAFLRSPWAYRTPLAVEVDVQTSVDGYVLRSRIDAVFPDPDAP
GDPHAVVVVDWKTGAPPTDPAERAHRELQLAVYRLAWSRWTGTPLESVRAAFCYVGAEQT
VWPQRLMDEAEIAAMLRGVTV
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgctgtccgcggtgcagatcgccgctctgctgaacaaggaaccgccgacgccg
gagcagcagcgggtgatcgagtcgccgttgcgcccggcgctggtcgtggccggggcgggc
tccggcaagacggagacgatggcggcgcgcgtcgtctggctgctggccaacggcctggcg
gcgcccgagcaggtcctcgggctcaccttcacccggaaggcggccggtgagctcgaggac
cgcgtccgtcggcggctgcgggcgctggtgcgcagcgcccggtcggctcggctggagctg
cccggtgcggagctcctcggcctgcacgacccggacgaccccctcggtgccttgagccgg
ccgaccgtctcgacgtaccacgcctacgccgcggggctggtcggcgagcacgcccttcgc
ctcggcctcgagcccggcgcccggctgctgggcgaggcggcgcagtggcagctggcggcc
gacgtcgtggagtcgtggtccggcgacctcgacacggacaaggcgacgtccaccgtggtg
gacgcggtgctcgagctgtccggcgcgctcgacgagcacctggtgacggtggcggacgcc
cggcgcgggatcgagcggatcgtcgacagcctgacgtcgacgcccgcgggggatccgccg
cggccgctgaagcaggagctccgcaccctgatcggctcgttgcaggagcggctgcggctg
ctcgacgtggtggccgcctaccgggaccgcaagcgcgccggagacgtcatcgacttcggc
gaccaggtcgcgctggccgccaggctggcggccgaggtgcccgccgtcgcgagcgccgag
cgggaccggtaccgcgtggtgctgctcgacgagtaccaggacacgtcccacgcccagctg
gagctgctgcgagccctcttcggcgacggccaccccgtgatggcggtcggggacccgcac
cagtccatctacggctggcgcggggccagtgcgggcggtctggaacggttcccgacctcg
ttcccggtggtggacgacggcggccggcggccggccgacgtgcaccagctctccacctcg
tggcgcaacgaccgggcgatcctcgacgcggcgaacctcgtggcgggtccgctgcgggct
gccgccgcggctcgcgcgcaccccgtggaggtcccggtgctcggcgcccggcccggcgcc
gggcccggtcacgtggcggcgctgatgtgcgccacggtggaggaggaggcgtcggcggtc
gcgcggttcgtcgccgagcggtggcgtccggcgagccaggacggccaccgcgtcaccgcc
gccgtcctgtgccgcaagcggtcgcagttcgaggcgctggcacctgccctgcgggcggca
gggctgccggtcgaggtggtcggtctcggggggctgctctcgacacccgaggtggtcgac
ctggtcgcggcgctgcaggcggcccacgacccgtcgcgcggagacgcgctgatgcggctg
ctcaccggggcgcgcacccggctcggtgccgcggacctgcacgcgctcgcggcctgggcg
cgcgagctcgccgcccgcggtccgggcaggtcgcggtcgaccgacgacggctctcgcgag
cacgacgtggtggacgagcgcagcatcgtcgacgcgctcgacgacctgcccgcaccgggt
tggcgcagccatgacgggcgcgtgctgaccgacgtcggccgggcccggctggcgcgcctc
gccaccgtgctccgtgacgtccgccggcacacctacctgccgttgccggagctggtggcg
gagaccgaacggctgctcggcctggacatcgaggtggcgtcccgaccgggcgtcggcccc
gcccgtgcccgcctgcacctcgactcgttcgcccaggtggccggcgagttcgcccgttct
gcggagctgcccaccctcggcggcttcctcgcctggctggaggcggccgacgcgcgcgag
gacggtctcgagctgcccgtgagcgagcccgacccggacgccgtccagctgatcaccgtg
cacgccgccaaggggctggagtgggacgtggtcgccgtgcccggcctggtggacggcgtg
cttcccgtgctggcgagcggggccgacgggccgacgagctcgggctggctgacggggctc
ggcacgctgccgtacccgctgcgaggtgaccgggacgacctccccgccttccgctacgcc
ggcgccgcgagcccgcaagacctggaccgacggcggctggagttccggctggacgccgga
cggcacgagctggcggaggagcggcggctcgcctacgtcgcactgacccgtgcgcggacg
gacctgctgctgacgggtgcctggtggggcaccgcgacccgaccacgggccgtctccccg
ttccttgccgagctgctcgaggcgggggcggtctcggaggccggctgggaggcgccgccc
gaggtgggcgcggccaacccgcgtgacgacgtggtggccaccacccagtggccaggcgac
ccgttcggcgacgacggtcggcgacgcgctgcactggaggaggcggcgggcgccgtgcgc
gccgccgcccagggcgccggcgggcccgacggtgccggaaccgcgtgggacgtgctcgcc
gaccggctgctcgccgagcggtccgccgctcgggagccggacgggcccgtggagctgccg
tcgcacctgtccgcgtcggcgctggtgcgcctcgacgccgacgcgaccggcttcgccgcg
gagctgcgccgcccggtcccgtcggcccccgccccgcaggcccgccgcggcacggccttc
cacgcctgggtcgagggctggttcggggctgcctcgctggtggacctcgatgcgctaccc
ggtgccgacgacgactcggtcgcggtcgatgccgacctctcggcgctgcgtgcggcgttc
ctgcgctccccgtgggcgtaccggacgccgctggccgtcgaggtggacgtgcagacgtcc
gtggacggctacgtgctgcgcagccgcatcgacgcggtgttcccggacccggacgcaccc
ggtgacccgcacgccgtggtggtggtcgactggaagacgggagcgccaccgaccgacccg
gccgagcgggcgcaccgcgagctgcagctggcggtgtaccggctcgcgtggtcgcggtgg
acgggaacaccgctggagtcggtgcgtgcggcgttctgctacgtcggcgcggagcagacg
gtgtggccgcagcgcctgatggacgaggcggagatcgccgcgatgctccgtggtgtcacc
gtgtga
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