Cellulomonas sp. NTE-D12: CELD12_26190
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Entry
CELD12_26190 CDS
T10634
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
celn Cellulomonas sp. NTE-D12
Pathway
celn03420
Nucleotide excision repair
celn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
celn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CELD12_26190
03430 Mismatch repair
CELD12_26190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
celn03400
]
CELD12_26190
Enzymes [BR:
celn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CELD12_26190
DNA repair and recombination proteins [BR:
celn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CELD12_26190
MMR (mismatch excision repair)
Other MMR factors
CELD12_26190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
BDO43129
LinkDB
All DBs
Position
complement(2839036..2841594)
Genome browser
AA seq
852 aa
AA seq
DB search
MTSLFENLSLPLPGSVRGTPASGSVRPTHVGESSGLPVVLPPREDERAGTSDVPDDDRAR
AREQAQARDEARAHELLEGLNPQQRAAVLHEGGPLLIVAGAGSGKTRVLTHRIAHLLATH
RARPGEILAITFTNKAAAEMRERVEALVGPSAQRMWVSTFHSACVRILRREATTLGLRSS
FSIYDSADSQRLLTLVARELDLDPKRYPAKALAAKISNLKDELVDPETFAATSGQGAAND
FDTALAQVYSRYQQRLRQASALDFDDLIMTTVNLLQAFPAVAEHYRRRFRHVLVDEYQDT
NHAQYVLVKELVGDGSDGVPRGELTVVGDADQSIYAFRGANIRNILEFEADYPDASTILL
EQNYRSTQTILSAANAVISRNPGRKPKRLWTDAGAGPQIVAYVADDEREEARFVAEEIDR
LGDTADVRPGDVAIFYRANAQSRAIEEVLVRVGLPYKVVGGTRFYERREIKDAVAYLRAI
ANPDDDVNTRRILNVPKRGLGERSEAMVAAFAERERISFGAALERLDEVPGLGTRAVTAL
AAFRELLGGLRELAADAGPATVLGAVLDRSGYLAELRASDDPQDGSRVDNLAELHAVATE
FEQGDPDGDLADFLERVSLVADSDQIPTPDGGDEGAGPDQGVVTLMTLHTAKGLEFPVVF
LTGLEDGTFPHLRSLSDPDQLAEERRLAYVGLTRARQRLYISRAAVRTAWGVPNEFPPSR
FLEDLPDELIDWRRRESSTSRIRGGWGSGFGSGGGRGSSWNDGPRGSSGGGGGSRTERAP
LPSTGATFGSAKPRPEGAVPTLAVGDKVTHDAYGLGTVVALEGAGPNAVVKVDFGSAGTK
RLLLRFSPVTKL
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgctgttcgagaacctgtccctgcccctccccgggtcggtccgcggcaccccc
gcgtccggctccgtccggcccacgcacgtcggggagtcctcgggcctgccggtggtgctc
ccgccccgggaggacgagcgcgcggggacgtccgacgtgccggacgacgaccgtgcgcgt
gcgcgcgagcaggcgcaggcgcgtgacgaggcccgcgcccacgagctgctcgaaggcctg
aacccgcagcagcgcgcggccgtgctgcacgagggcggtccgctgctgatcgtcgcgggc
gccggctccggcaagacgcgcgtgctgacccaccggatcgcgcacctgctggccacgcac
cgcgcccgcccgggggagatcctcgcgatcaccttcaccaacaaggccgccgccgagatg
cgcgagcgcgtcgaggccctggtcggcccctcggcgcagcggatgtgggtgtccaccttc
cactcggcgtgcgtgcgcatcctgcgccgcgaggccaccacgctcggcctgcgctcctcg
ttctccatctacgactcggcggactcgcagcgcctgctgacgctggtcgcccgtgagctc
gacctggatcccaagcgctacccggccaaggcgctcgcggccaagatcagcaacctcaag
gacgagctggtcgaccccgagacgttcgcggcgaccagcggccagggcgccgccaacgac
ttcgacaccgcgctggcgcaggtctactcgcgctaccagcagcgactccgacaggccagc
gcgctggacttcgacgacctgatcatgaccacggtcaacctgctgcaggcgttcccggcg
gtcgccgagcactaccgccgccggttccggcacgtgctggtggacgagtaccaggacacc
aaccacgcgcagtacgtgctggtcaaggagctggtgggcgacggctcggacggcgtgccg
cgcggcgagctgacggtcgtgggcgacgccgaccagtcgatctacgcgttccgcggcgcc
aacatccgcaacatcctcgagttcgaggcggactacccggacgcgagcaccatcctgctc
gagcagaactaccgctccacgcagacgatcctctccgccgccaacgcggtgatctcccgc
aacccgggccgcaagcccaagcggctgtggaccgacgccggtgccggcccgcagatcgtc
gcgtacgtcgccgacgacgagcgcgaggaggcccggttcgtcgccgaggagatcgaccgc
ctcggtgacaccgccgacgtgcggcccggtgacgtcgcgatcttctaccgggccaacgcg
cagtcccgtgcgatcgaggaggtgctggtccgcgtcggcctgccctacaaggtggtcggc
ggcacgcggttctacgagcgccgcgagatcaaggacgccgtcgcctacctgcgcgcgatc
gccaacccggacgacgacgtgaacacccgccgcatcctcaacgtgcccaagcgtgggctg
ggggagcggtcggaggcgatggtggccgccttcgccgagcgggagcggatcagcttcggc
gcggcgctcgagcggctcgacgaggtgccggggctcggcacccgggcggtgacggcgctg
gccgcgttccgtgagctgctgggcggcctgcgcgagctggcggccgacgcgggtccggcg
accgtgctcggtgcggtgctggaccgcagcggctacctggcggagctgcgagcgtcggac
gacccgcaggacggctcccgcgtggacaacctcgccgagctgcacgccgtggccaccgag
ttcgagcagggcgaccccgacggggacctggccgacttcctcgagcgcgtgtccctggtg
gcggactccgatcagatccccacgccggacggcggggacgagggcgccggccccgaccag
ggcgtcgtcaccctgatgacgctgcacaccgccaaggggctggagttcccggtggtgttc
ctcacgggcctcgaggacggcacgttcccgcacctgcggtcgctgtccgacccggaccag
ctcgcggaggagcgccggctcgcgtacgtggggctgacgcgcgcccggcagcggctgtac
atctcccgcgccgcggtccgcaccgcgtggggcgtgccgaacgagttcccgccgagccgg
ttcctcgaggacctgccggacgagctgatcgactggcggcggcgcgagtcgtcgacgtcg
cggatccgcggcggctgggggtccgggttcggcagcggcgggggccgcgggtcgtcctgg
aacgacgggccacgtggatcgtccggcggcggaggcgggtcgcggaccgagcgggcgccc
ctgccgtccacgggcgccacgttcgggtccgccaagccccgacctgagggcgcggtcccc
accctcgccgtcggcgacaaggtgacgcacgacgcctacggcctagggacggtcgtggcg
ctcgagggtgccggtcccaacgcggtggtcaaggtcgacttcggctcggccggaaccaag
cggctgctgctccggttctcgcccgtcaccaagctgtag
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