Cellulomonas sp. NTE-D12: CELD12_27020
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Entry
CELD12_27020 CDS
T10634
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
celn Cellulomonas sp. NTE-D12
Pathway
celn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
celn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CELD12_27020 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celn03021
]
CELD12_27020 (rpoA)
03400 DNA repair and recombination proteins [BR:
celn03400
]
CELD12_27020 (rpoA)
Enzymes [BR:
celn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CELD12_27020 (rpoA)
Transcription machinery [BR:
celn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CELD12_27020 (rpoA)
DNA repair and recombination proteins [BR:
celn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CELD12_27020 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BDO43212
LinkDB
All DBs
Position
complement(2931126..2932139)
Genome browser
AA seq
337 aa
AA seq
DB search
MLIAQRPTLTEEVISEHRSRFSIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTELILNIKNLVVSSENDEPVVMYLRKQGAGQVTAADIVPPAGVEVHN
PELHLATLNDKGKLEIELTVERGRGYVSASQNKSFDTEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKPAISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
AALAADLALPIEDLQLTIRSYNCLKREGIHTVGELVARSEADLLDIRNFGAKSITEVKEK
LAELGLSLKDSPIDFDATAGAGYYADDEVDFSEDEQY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgccccaccctgaccgaagaggtcatctcggagcaccgctcgcgg
ttctccatcgagccgctggagccgggcttcggctacacgctcggcaactccctgcgccgg
acgctcctgtcgtccatcccgggtgcggccgtcaccagcatccgcatcgacggcgtgctg
cacgagttctccaccgtgccgggggtcaaggaggacgtcaccgagctgatcctcaacatc
aagaacctggtcgtctcctccgagaacgacgagccggtggtcatgtacctgcgcaagcag
ggtgccggtcaggtgaccgcggcggacatcgtcccgccggccggtgtcgaggtgcacaac
cccgagctgcacctggcgacgctgaacgacaagggcaagctcgagatcgagctgaccgtc
gagcgtggtcgtggctacgtctccgccagccagaacaagtcgttcgacaccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcg
acccgcgtcgagcagcgcaccgacttcgacaagctgatcgtggacgtcgagaccaagccg
gcgatcagcccgcgcgacgcgctggcctccgccggcaagacgctggtcgagctgttcggg
ctggcccgcgagctcaacgtcgaggccgagggcatcgagatcggcccgtcgccgacggac
gccgcgctcgccgccgacctggcgctgccgatcgaggacctgcagctgaccatccggtcg
tacaactgcctcaagcgcgagggcatccacacggtgggcgagctcgtcgcacggtccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtccatcaccgaggtcaaggagaag
ctggccgagctgggactgagcctgaaggacagcccgatcgacttcgacgcgacggccggt
gccggctactacgccgacgacgaggtcgacttcagcgaggacgagcagtactga
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