Cellulomonas sp. NTE-D12: CELD12_32410
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Entry
CELD12_32410 CDS
T10634
Name
(GenBank) hypothetical protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
celn Cellulomonas sp. NTE-D12
Brite
Enzymes [BR:
celn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CELD12_32410
Messenger RNA biogenesis [BR:
celn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CELD12_32410
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDO43751
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Position
3502563..3507317
Genome browser
AA seq
1584 aa
AA seq
DB search
MSGPDEHERGAERPRRRGAGRPDRHAGRDGHRHGDGDGAPGNSPDQRGARRRERVAHLRA
QVELPPVTYPEELPVSARRAEIAATIAAHQVVVVAGETGSGKTTQLPKILLELGRGRAGQ
IGHTQPRRIAARTVAERVADELGVPLGGVVGYQVRFTDESSDHTLVKVMTDGILLAQIQR
DPQLLAYDTIVVDEAHERSLNIDFILGYLTRLLPQRPDLKLVITSATIDSERFASHFAAA
DGTPAPIVEVTGRTYPVDVRYRPLSPDRAAEESALGAGGEDDDEGADDHTAPGRSRRAGA
AAAPGRRGAGRGKGSPAAAARRPRAEAKDLVTGIVEAVDELMAAGPGDVLVFLSGEREIR
DAEDGLRGALGPRVTDPQHPQAVELLPLYARLSAAEQRRVFEPHGKRRVILATNVAETSL
TVPGVRYVVDPGTARISRYSQATKVQRLPIEPISQASANQRSGRSGRVAPGIAIRLYSAD
DLASRPEYTEPEILRTSLASVILQMIAVGVVRTPDEVAQFPFVDPPDVRAVRDGVALLTE
LGALSTGPGGTRLTGTGRALAQLPIDPRLARMIVEAGKRDVAREVVVIAAALSIQDPRER
PADQREVADALHRRFVDPSSDLLTYLNLWQWLREQRHALSGSAFRRLVRSEHLNYLRVRE
WQDVVTQLRDMVKGLGIDARGGPRPVGDGAPAGAKDGAGDGSGGRGRGAVVRDGGRRLPP
GAVVAEQPPTAQPASEAAVVGAPEGLTERTTWAWDGDRIHLAVLAGLLSQIGMQEATEVT
PAARSGRNAPPQGRGRPRPRNEYLGARNARFAIFPGSGLARRPPAWVMAAELVETSRLWA
RDVARIRPEWAEELAGHLVRRSYSEPAWSTRQGAATVTEKVTLYGVPIITDRRILLGSVD
RAQARELFIRHALVQGEWTTHHTFFHENRRLLAEAQALEARARRRDLVVDDDVLFDFYDE
RVPDDVVSARHFDTWWKGARRSQPELLAFTRNLLVAPGAQQIDESAFPSRWPQGDVSMPL
TYQFEPGTEADGVTVHIPLVTLARLRPEGFDWMVPGVRAELVTATIRALPKPVRVQLVPA
PDVARAVDAWMDEHLASWEDTVRAGDAAPSFHEAFAQAVRAMRDVEVPPDAFDDERLPPH
LRMTFRVVDAGGGVLDEGKDLVALQRRLAGDAQDAVSSAVRTAVAAALAEARAGTERPDR
GGRGRGRAGDARAGRSTAGPIPAVDGSASGTAPGGARIATTAGASTSGPGRPGSSTDGLA
TPLPGGDLERSGLRTWPDLPDRAGEPAGTLPDQVSTTAVGGVVVRAYPSLVELAATGVTA
PSVGVRLLADAGAVPGEYRRGLRRLLLVDVGLAAARVSSRWTGAQALALAASPYPDTAAL
VTDVQLAAIDRLITRHLAATAAGAAPEAAVRDAAAYTALRTAVRDRLEDEVHRLVADLVA
VLTAWREVQAAVRASSSLALLGTARDVRDQTDALVHDRFVTAVGADRLPQLTRYLRAAAY
RLTKAAENPQRDESLAAQVREVQGLYRDTVARAAGRAPDAARTAALDEVRWMLEELRVSL
FAQQLGTPVPVSTTRIRKALAAIT
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggtcccgacgagcacgagcgcggtgcggagcgtccgcgccgacgcggcgccggg
cgtccggaccggcacgcgggccgggacgggcaccgccacggcgacggggacggcgcgccg
gggaacagtcccgaccagcgcggcgcccgccgccgcgagcgcgtcgcgcacctgcgcgcg
caggtggagctgccgcccgtcacgtacccggaggagctgccggtcagcgccaggcgggcg
gagatcgcggcgaccatcgcggcccaccaggtggtggtggtcgcgggggagacgggcagc
ggcaagacgacgcagctgcccaagatcctgctcgagctcggccggggtcgggcggggcag
atcggtcacacgcagccgcggcggatcgccgccaggaccgtcgccgagcgggtggccgac
gagctcggcgtgcccctcggcggcgtcgtcggctaccaggtgcggttcaccgacgagtcg
agcgaccacacgctcgtcaaggtgatgaccgacggcatcctgctggcgcagatccagcgc
gacccgcagctgctcgcctacgacacgatcgtggtcgacgaggcccacgagcggtcgctg
aacatcgatttcatcctcgggtacctcacccggctgctgccgcagcggccggacctcaag
ctcgtcatcacctcggcgaccatcgactcggagcggttcgcgtcgcacttcgccgccgcg
gacggcacgcccgcgcccatcgtggaggtcaccggccggacgtacccggtggacgtgcgg
taccgcccgctgtcgccggaccgggcggcggaggagtccgcgctcggggcgggcggcgag
gacgacgacgagggggcggacgaccacaccgcgcctggccggtcgaggcgtgccggtgcc
gcggccgcgccgggcagacgcggtgccggccggggcaagggctcgccggcggctgccgcg
aggcgtccgcgtgccgaggcgaaggacctggtcacgggcatcgtcgaggcggtcgacgag
ctgatggccgccggaccgggcgacgtgctcgtcttcctctccggcgagcgcgagatccgg
gacgccgaggacgggctgcgcggtgcgctcggcccgcgggtgaccgacccgcagcacccg
caggccgtcgagctgctgccgctgtacgcccggctgtccgccgcggagcagcggcgcgtg
ttcgagccgcacggcaagcggcgcgtgatcctggcgaccaacgtcgccgagacgtcgctg
acggtgccgggcgtccggtacgtcgtcgacccggggacagcccgcatctcgcggtactcg
caggcgaccaaggtgcagcggctgcccatcgagccgatctcgcaggcgtccgccaaccag
cgctccggccggtccggccgcgtggcccccggcatcgcgatccggctgtactcggccgac
gacctggcgtcccgcccggagtacaccgagccggagatcctgcgcacgtcgctggcgtcg
gtgatcctgcagatgatcgccgtcggtgtggtccgcacccccgacgaggtcgcgcagttc
ccgttcgtcgacccgccggacgtgcgcgcggtgcgcgacggcgtcgccctgctgaccgag
ctcggtgcgctgtccaccggaccgggcggcacccgcctgaccggcaccggccgggcgctg
gcccagctgccgatcgacccccgcctggcgcggatgatcgtcgaggccggcaagcgggac
gtggcccgcgaggtcgtcgtcatcgcggcggccctgtccatccaggacccccgcgagcgc
ccggccgaccagcgcgaggtggccgacgccctgcaccggcgcttcgtcgacccgtcgtcg
gacctgctgacctacctgaacctgtggcagtggctgcgcgagcagcggcacgcgctgagc
ggctccgcgttccggcggctggtgcgctcggagcacctcaactacctgcgcgtccgcgag
tggcaggacgtggtgacgcagctgcgcgacatggtgaaggggctggggatcgacgcccgc
ggcggtccccgaccggtcggcgacggcgcaccggccggcgcgaaggacggcgcgggcgac
ggcagtggcgggcgcggacgcggcgccgtggtgcgggatggtggccgacggctgccaccc
ggtgccgtggtcgcggagcagccgccgacggcccagccggcgagcgaggccgccgtcgtc
ggggcccctgagggtctcaccgaacgcaccacctgggcctgggacggcgatcggatccac
ctcgccgtgctggccggtctgctgtcgcagatcggcatgcaggaggccaccgaggtcacc
cccgccgcgcgctcgggccgcaacgcgccgccgcagggccgcggtcgcccccgcccgcgc
aacgagtacctgggtgcccgcaacgcgcggttcgccatcttccccggctcgggcctggcc
cgccgaccccctgcgtgggtgatggccgccgagctcgtggagacgtcccgcctgtgggcg
cgcgacgtcgcccgcatccgtccggagtgggccgaggagctggccggccacctcgtccgg
cgcagctactccgaaccggcgtggagcacgcggcagggcgccgcgacggtgaccgagaag
gtgacgctctacggcgtgccgatcatcaccgaccggcgcatcctgctcggctcggtggac
cgcgcgcaggcacgggagctgttcatccggcacgcgctggtgcagggcgagtggaccacc
caccacacgttcttccacgagaaccgccgcctcctggccgaggcgcaggcgctcgaggcc
cgcgcccgccgccgcgacctggtggtggacgacgacgtgctgttcgacttctacgacgag
cgggtgccggacgacgtggtctcggcccggcacttcgacacctggtggaagggcgcccgg
cggtcccagccggagctgctggcgttcacccgcaacctgctggtggcgcctggtgcgcag
cagatcgacgagtcggcgttcccctcgcggtggccgcagggggacgtcagcatgccgctg
acctaccagttcgagcccggcaccgaggccgacggcgtgacggtgcacatccccctggtc
acgctcgcgcggctgcgtccggaggggttcgactggatggtcccgggggtgcgcgccgag
ctggtcaccgccaccatccgtgcgctgccgaagccggtgcgggtgcagctggtgccggcg
ccggacgtggcgcgggctgtggacgcgtggatggacgagcacctcgcgtcctgggaggac
accgtgcgggccggcgacgcggcgccgtcgttccacgaggcgttcgcacaggcggtccgg
gccatgcgtgacgtggaggtgccgcccgacgcgttcgacgacgagaggctgccgccgcac
ctgcggatgacgttccgcgtggtcgacgccggtgggggcgtgctcgacgagggcaaggac
ctggtggccctgcagcggcggctggccggggacgcgcaggacgcggtgtcctccgctgtt
cggacggccgtggctgccgcgctcgccgaggcgcgcgccggtacggagcggccggaccgc
ggcgggcggggacgcggtcgtgcgggcgacgcccgtgcgggccggtccaccgcggggccg
atcccggccgtcgacggctccgcctccgggaccgcacccggcggcgcccgcatcgccacg
accgccggcgcctcgacgtccggccccggccggccgggctcgtccaccgacggcctggcg
acgccgctgccgggcggcgacctggagcgcagcggcctgcgcacgtggcccgacctgccg
gaccgcgccggtgaacccgccggcacgctgccggatcaggtgagcaccaccgccgtgggt
ggcgtcgtggtgcgggcgtacccctccctcgtcgagctggcggcgacgggcgtcacggca
ccgtcggtcggggtgcggctgctcgccgacgcgggcgccgtcccgggcgagtaccgccgc
ggcctgcgccgcctgctgttggtcgacgtcgggctggcggccgcccgggtctcgtcccgc
tggaccggcgcgcaggcgctcgcgctcgcggcctccccgtacccggacacggctgccctg
gtcacggacgtgcagctggccgcgatcgaccggctgatcacgcggcacctcgctgccacg
gccgccggcgccgcaccggaggcggccgtgcgcgacgccgccgcgtacacggcgctgcgc
accgccgtccgcgaccgtctggaggacgaggtgcaccgcctggtcgccgacctcgtcgcc
gtcctcaccgcctggcgcgaggtgcaggccgcggtccgcgcctcgtcgtccctcgccctg
ctcggcaccgcccgtgacgtccgcgaccagacggacgccctggtgcacgaccgtttcgtc
acggcggtcggcgccgaccgcctgccccagctgacgcggtacctgcgcgccgccgcgtac
cggctgaccaaggcggccgagaacccgcagcgcgacgagtcgctggccgcccaggtgcgg
gaggtgcagggcctgtaccgggacaccgtcgcccgcgccgccggccgagcgccggacgcg
gcccggacggcagccctggacgaggtccgctggatgctcgaagagctgcgcgtcagcctg
ttcgcccagcagctgggcaccccggtcccggtgtccaccacccgcatccgcaaggcgctc
gccgccatcacctga
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