Cellulomonas shaoxiangyii: E5225_04350
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Entry
E5225_04350 CDS
T05988
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
celz
Cellulomonas shaoxiangyii
Pathway
celz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
celz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E5225_04350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celz03021
]
E5225_04350
03400 DNA repair and recombination proteins [BR:
celz03400
]
E5225_04350
Enzymes [BR:
celz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E5225_04350
Transcription machinery [BR:
celz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E5225_04350
DNA repair and recombination proteins [BR:
celz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E5225_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BssS
Cluap1
Motif
Other DBs
NCBI-ProteinID:
QCB92898
UniProt:
A0A4P7SGW8
LinkDB
All DBs
Position
955690..959559
Genome browser
AA seq
1289 aa
AA seq
DB search
MLDVNVFDELRIGLASADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDVDGRAEDLPNLQNEIDLEKKEIADRRDNDINTRAAKLEAD
LAELEAEGAKADARRKVRDSAEREMAQLRKRADAELDRLEQVWDRFKNLKVADLEGDEML
YRQLQDRYGNYFEGSMGASAIQKRLEAFDLDAEATSLRETIRSGKGQRKTRALKRLKVVN
AFLTTTNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDKDDALGAGR
AFSSVAEAIMAFDQGSLDLNAVVKIRFDDLVLGEDQAPEGWEPGQTLLFETTLGRALFNE
LLPVDYPYENGVVDKKRLSVIVNDLAERYPKVEVAASLDALKEAGFRWATRSGVTIAISD
VATPAAKKEILEEHEAKAARVQGQYEKGLITDDERRQELIEIWTNATDKVAKAMQANFPA
RNTVYRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKANYREGLSVLEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERGLTMPIGVATADGTLRRHDK
VETSVYSRTLATDIEVEGEVVGHAGDDVGDVLLDRLLETGVTELKIRSVLTCESRVGTCA
KCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQEL
FEARTPKGEAPIAEFSGRVAIEEGDRSRRIVLTPDDGSEEIAYPITKRSRLVVQDGDHVA
VGTQLVQGAVDPKKVLRILGPRATQKHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLRRVT
VLDSGETGLLPGELAERGRFEDFNRKAVSEGGQPASGRPELMGITKASLATDSWLSAASF
QETTKVLTEAAMSSRSDPLLGLKENVILGKLIPAGTGLARYRNVEVEATEEAKAELYPAF
GYDEIDFPALGLGSGEAIPLEDIDFGDYR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgcatcggcctggcctcggccgacgacatc
cgtgcctggtcgcacggcgaggtgaagaagcccgagaccatcaactaccggacgctgaag
ccggagaaggatggcctgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgctcgaaggtccgccgtgagcgcatgggccacatcgagctggccgcaccg
gtcacgcacatctggttcttcaagggtgtgcccagccggctcggctacctgctcgacctg
gcgccgaaggacctggagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gtggacggccgtgccgaggacctcccgaacctccagaacgagatcgacctggagaagaag
gagatcgcggaccgccgcgacaacgacatcaacacccgcgccgcgaagctcgaggccgac
ctggccgagctcgaggccgagggtgcgaaggccgacgcccgccgcaaggtgcgcgactcc
gccgagcgcgagatggcgcagctgcgcaagcgtgccgacgcggagctcgaccgcctcgag
caggtgtgggaccggttcaagaacctcaaggtcgcggacctcgagggcgacgagatgctg
taccgccagctgcaggaccggtacggcaactacttcgagggctcgatgggcgcgtcggcg
atccagaagcgcctcgaggcgttcgacctggacgccgaggcgacgtcgctgcgcgagacc
atccgctcgggcaaggggcagcgcaagacgcgcgcgctcaagcgcctgaaggtcgtcaac
gcgttcctcacgacgacgaactcgccgaccggcatggtcctcgacgcggtcccggtcatc
ccgccggacctgcgcccgatggtccagctcgacggtggtcgcttcgcgacgtccgacctg
aacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaagcggctcctggacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggactcg
ctgttcgacaacggccgccgcggccgcccggtgacgggccccggcaaccgtccgctcaag
tcgatctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcgcgcgc
ccggtcgtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgtctgggcatccaggcgttcgagccgcagctggtcgagggcaag
gcgatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggcgaccag
atggccgtgcacctgcccctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggccgtccggtgaccatgccctcgcaggac
atgatcatcggcctgtaccacctgacgagcgacaaggacgacgcgctcggcgccggccgg
gcgttcagctcggtggccgaggcgatcatggcgttcgaccagggcagcctggacctcaac
gccgtggtgaagatccgcttcgacgacctggtgctcggcgaggaccaggcgcccgagggc
tgggagccggggcagacgctgctgttcgagacgacgctcggccgtgcgctcttcaacgag
ctgctgccggtcgactacccgtacgagaacggcgtcgtcgacaagaagcgcctgtcggtc
atcgtcaacgacctggccgagcggtacccgaaggtcgaggtcgccgcgtcgctcgacgcc
ctgaaggaggccggcttccgctgggccacccgctcgggcgtcacgatcgccatctcggac
gtcgccacgccggcggccaagaaggagatcctcgaggagcacgaggcgaaggccgcgcgc
gtccagggccagtacgagaagggcctcatcaccgacgacgagcgtcgtcaggagctcatc
gagatctggaccaacgccaccgacaaggtcgccaaggcgatgcaggccaacttcccggcc
cgcaacaccgtctaccgcatggtcggctcgggcgcgcgaggcaactggatgcaggtccgc
cagatcgcgggcatgcgtggcctcgtcgccaacccgaagggcgagatcatcccgcgcccg
atcaaggcgaactaccgcgagggcctgtccgtcctcgagtacttcatcgcgacgcacggc
gcccgcaagggcctggcggacaccgctctgcggaccgccgactcgggctacctcacgcgt
cgtctggtggacgtctcgcaggacgtcatcgtccgcgaggaggactgcgggaccgagcgc
ggcctgaccatgccgatcggcgtggcgaccgcggacggcacgctgcgccgccacgacaag
gtcgagacgtccgtgtactcgcggacgctcgcgaccgacatcgaggtggagggcgaggtc
gtcggccacgccggtgacgacgtcggcgacgtgctgctcgaccggctcctcgagacgggg
gtcaccgagctcaagatccgctcggtgctcacctgcgagtcccgcgtcggcacctgcgcc
aagtgctacggccgttcgctcgcgaccggcaagctcgtcgacatcggcgaggccgtcggc
atcatcgcggcccagtcgatcggtgagcccggcacccagctgacgatgcgtacgttccac
accggtggtgtggcctcggcggacgacatcacgcagggtctgccgcgtgtccaggagctc
ttcgaggcccgcacccccaagggtgaggcgccgatcgcggagttctcgggccgcgtggcg
atcgaggagggtgaccgctcgcggcgcatcgtcctcacgccggacgacggctcggaggag
atcgcctacccgatcaccaagcgctcgcgcctggtcgtgcaggacggcgaccacgtcgcc
gtcggcacccagctcgtccagggtgcggtggacccgaagaaggtcctgcgcatcctcggc
ccgcgcgccacgcagaagcacctggtggacgaggtccaggaggtctaccgctcgcagggc
gtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcgccgcgtgacg
gtgctcgactccggggagacgggcctgctgcccggcgagctggccgagcgcggtcgcttc
gaggacttcaaccgcaaggcggtctccgagggcggtcagccggcctccgggcgtccggag
ctcatgggcatcacgaaggcgtcgctcgcgaccgactcgtggctctccgccgcctccttc
caggagacgacgaaggtgctcaccgaggccgcgatgtcgagccgttccgacccgctgctg
ggtctgaaggagaacgtcatcctcggcaagctcatcccggcgggtaccggcctggcccgg
taccgcaacgtcgaggtggaggcgaccgaggaggcgaaggccgagctgtacccggccttc
ggctacgacgagatcgacttccccgccctgggcctcggctcgggcgaggcgatcccgctc
gaggacatcgacttcggcgactaccgctga
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integrated database retrieval system
