Cellulomonas shaoxiangyii: E5225_07470
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Entry
E5225_07470 CDS
T05988
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
celz
Cellulomonas shaoxiangyii
Pathway
celz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
celz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E5225_07470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celz03021
]
E5225_07470
Transcription machinery [BR:
celz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E5225_07470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QCB93418
UniProt:
A0A4P7SIG0
LinkDB
All DBs
Position
1617741..1619318
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AA seq
525 aa
AA seq
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MTSQTPHPALPREFQHPALQELVKRGHTHGSVDTDSVRAACEAAGVEGPKRLRAVVRGLG
TAGVTVNDLGSAGRAVAATSAKSRPAAKASVVVDAARAEAPAARPKAAAKPATKAAAKPA
STGPKTAAAKAAAAKAAKAAPGDEAVDEAVVLEDVEIEDVVIEDVETPDDEVTATDEEAT
PVAGAVAAAPAAKEETSTSEDVGFVYSDADDDDAPAQQVVTAGATADPVKDYLKQIGKVA
LLNAEQEVELAKRIEAGLFAEERLNAGLQLEPKARRELEWIAQDGRRAKNHLLEANLRLV
VSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQA
RTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVVEVQKYGREPISL
HTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHQVLDTLSEREAGVVSMRFGLTD
GQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcccagaccccgcaccccgcacttccgcgcgagttccagcacccggcgctgcag
gagctggtgaagcgcgggcacacccacggcagcgtcgacaccgactccgtgcgcgccgcc
tgcgaggccgccggcgtcgagggccccaagcgcctgcgcgccgtggtccgcgggctcggc
accgccggtgtgacggtcaacgacctcggctctgccggccgcgccgtcgcggcgaccagc
gccaagtcccgtcccgccgcgaaggcgtcggtcgtcgtcgacgctgctcgtgccgaggcc
cccgccgcgcggccgaaggccgcggcgaagccggccaccaaggcagcggccaagcccgcg
tcgaccggtcccaagacggccgccgcgaaggccgccgccgccaaggccgccaaggccgcg
cccggtgacgaggccgtcgacgaggccgtggtgctcgaggacgtcgagatcgaggacgtc
gtgatcgaggacgtcgagacgcccgacgacgaggtgaccgcgacggacgaggaggccact
cccgtggccggtgccgtcgccgcggcgcctgcggcgaaggaggagacgtccacgtccgag
gacgtcggcttcgtgtactccgacgcggacgacgacgacgcccccgcgcagcaggtcgtc
acggccggtgccaccgccgaccccgtgaaggactacctcaagcagatcggcaaggtcgcc
ctcctcaacgccgagcaggaggtcgagctcgccaagcggatcgaggccggcctcttcgcc
gaggagcggctgaacgccgggctgcagctcgagcccaaggcacgccgggagctcgagtgg
atcgcgcaggacggtcgccgtgccaagaaccacctgctcgaggccaacctgcggctcgtc
gtctcgctggccaagcgctacacgggccgcggcatgctcttcctggacctgatccaggag
ggcaacctcgggctcatccgcgcggtcgagaagttcgactacaccaagggctacaagttc
tcgacgtacgcgacgtggtggatccgccaggccatcacccgtgccatggcggaccaggcg
cggaccatccgcatcccggtgcacatggtcgaggtcatcaacaagctcgcgcgcgtccag
cgccagatgctccaggacctgggccgcgagcccacgccggaggagctggccaaggagctc
gacatgacgcccgagaaggtcgtcgaggtccagaagtacggccgcgagcccatctcgctg
cacacccccctcggcgaggacggcgacagcgagttcggcgacctcatcgaggactccgag
gcggtcgtcccggccgacgcggtgagcttcacgctcctgcaggagcagctgcaccaggtc
ctcgacacgctgtccgagcgtgaggcgggcgtcgtctcgatgcgcttcggtctcaccgac
ggccagccgaagacgctggacgagatcggcaaggtctacggcgtcacgcgggagcggatc
cgccagatcgagtcgaagacgatgtcgaagctgcggcacccgtcgcgctcgcaggtcctg
cgcgactacctcgactga
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