Cellulomonas shaoxiangyii: E5225_08555
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Entry
E5225_08555 CDS
T05988
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
celz
Cellulomonas shaoxiangyii
Brite
KEGG Orthology (KO) [BR:
celz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
celz03019
]
E5225_08555
Enzymes [BR:
celz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E5225_08555
Messenger RNA biogenesis [BR:
celz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E5225_08555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
nSTAND_NTPase5
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCB93605
UniProt:
A0A4V1CMN9
LinkDB
All DBs
Position
complement(1877402..1880245)
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AA seq
947 aa
AA seq
DB search
MARSPRPRTSDPELSPAERYAAARRRATSERSALAAFRSRLDFPLDDFQVEACAALERGS
GVLVAAPTGAGKTVVGEFAVHLALESGRKAFYTTPIKALSNQKYADLARVHGQERVGLLT
GDTNVNGDADVVVMTTEVLRNMLYAGSPALAGLGYVVMDEVHYLADRFRGPVWEEVIIHL
PDDVQLVSLSATVSNAEEFGDWLSTVRGDTTVVVSEHRPVPLGQHVLVGDDLLDLYAGHV
DPTDPGVDPPINPDLTHVLRRQSADPRDRRGPGDRGRGGRRPGIGVRQAPRFAVVDTLAQ
ESLLPAIVFIFSRAGCEAAVQQCLSAGVRLTTPAEQAEIRRVAEERCAAIPPEDLGVLGF
DSFEEALARGVAAHHAGMLPLFKETVEDLFSRGLVKVVFATETLALGINMPARSVVLERL
VKWDGSSHVDITPGEYTQLTGRAGRRGIDTEGHAVVVAHTGLDPVQLAGLASRRLYPLRS
SFRPTYNMAVNLVAQVGRDRAREVLETSFAQFQADRGVVGLARQAQSHAEALDGYAEAMS
CDLGDFTEYAALRRGIGERERDLAKQAASARRADVARTLEGLRVGDVLEVPTGRRASYAV
VVDPGGRPGFDGPRPTVLSTDRQVRRLTVADVGTGARTVGSLRVPSSFNVRVPAARRDLA
ARLRARLDELDLAPAPGRPGRRDARRTAAADDAELEGMRRRLRAHPCHRCPDREEHARWA
DRWHRLKGEHDALVARIAGRTGSIAAVFDRICDVLVTLGYLERTEAEATTPTGGTALAVT
DAGQWLRRIYAENDLLLAECLRRGVWEELDPPQLAAAVSALVYRSRRDEEIEPRVPGGPQ
SRLGRALDAAVRAWSELEDLEHGHRLETIQPLDTGLVEPIHRWAAGRSLDAVLRGGDLAA
GDFVRWVKQVVDVLDQIHGAAPTARLRTTADRAVTALRRGVVAYSAV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgttccccccgtccccgcaccagcgatcccgagctctccccggccgagcgctac
gccgcggcccggcgccgtgcgacctcggagcgcagcgccctggcggcgttccgctcccgg
ctcgacttcccgctcgacgacttccaggtggaggcctgcgcagcgctcgagcgcggcagc
ggcgtcctcgtcgcggcgccgaccggcgcgggcaagaccgtcgtcggcgagttcgccgtg
cacctcgcgctggagtccggacgcaaggccttctacacgacgccgatcaaggcgctctcc
aaccagaagtacgcggacctcgcccgcgtgcacggccaggagcgcgtcgggctcctcacc
ggggacaccaacgtcaacggcgacgccgacgtcgtggtcatgacgaccgaggtgctccgc
aacatgctctacgcggggtcgccggcactggccgggctcggctacgtcgtcatggacgag
gtgcactacctcgcggaccggttccgcgggcccgtgtgggaggaggtgatcatccacctg
cccgacgacgtgcagctggtgtccctctccgcgacggtgtcgaacgccgaggagttcggc
gactggctgtcgaccgtccgcggcgacacgacggtcgtggtgagcgagcaccgccccgtg
ccgctcggtcagcacgtcctcgtgggcgacgacctcctcgacctctacgccgggcacgtc
gacccgacggaccccggtgtggacccgcccatcaaccccgatctcacgcacgtgctgcgc
cggcagtcggccgacccgcgcgaccggcggggcccgggggaccgtggccgcggtggccgg
cgtccgggcatcggggtgcggcaggcgccgcggttcgcggtggtcgacacgctggcgcag
gagagcctgctgcccgcgatcgtcttcatcttctcgcgcgccgggtgcgaggctgcggtg
cagcagtgcctgtcggccggagtgcggctgaccacccctgccgagcaggcggagatccgc
cgcgtcgccgaggagcgctgcgcggccatcccgcccgaggacctgggggtgctcggcttc
gactccttcgaggaggccctcgcgcgcggcgtcgcggcgcaccacgcgggcatgctgccg
ctgttcaaggagaccgtcgaggacctgttctcgcgcggcctggtcaaggtggtgttcgcg
accgagacgctcgcgctgggcatcaacatgccggcgcgctcggtcgtgctcgagcggctc
gtgaagtgggacgggtcgtcgcacgtcgacatcacgccgggggagtacacccagctcacc
ggccgcgcggggcggcggggcatcgacaccgagggccacgccgtcgtcgtcgcccacacg
gggctcgaccccgtgcagctcgccggcctggcgtcgcgccggctgtacccgctgcgctcg
tcgttccggcccacgtacaacatggcggtgaacctcgtcgcgcaggtcggtcgcgaccgc
gcccgcgaggtgctcgagacgtcgttcgcgcagttccaggcggaccgcggcgtggtgggg
ctcgcccggcaggcccagtcgcacgccgaggcgctcgacgggtacgccgaggcgatgtcg
tgcgacctcggcgacttcaccgagtacgcggcgctgcgccggggcatcggcgagcgtgag
cgtgacctcgcgaagcaggcggcctcggcccgccgtgccgacgtggcacgcacgctcgag
ggcctgcgcgtcggcgacgtcctcgaggtgcccacggggcgtcgcgcgtcgtacgcggtc
gtcgtcgacccgggcgggcgccccggcttcgacggccctcggcccacggtcctctccacc
gaccgccaggtgcgccgactcacggtcgcggacgtgggcacgggggcccgcaccgtgggc
tcgctgcgcgtgccgtcgtcgttcaacgtgcgcgtgcccgccgcccggcgcgacctggcc
gcgcgcctgcgggcccgcctcgacgagctcgacctcgcccccgcacccgggcggccgggc
cgccgcgacgcccgccgcacggccgcggcggacgacgcggagctggagggcatgcggcgc
cggctgcgcgcgcacccgtgccaccgctgcccggaccgcgaggagcacgcccggtgggcg
gaccgctggcaccggctcaagggcgagcacgacgccctcgtcgcgcgcatcgccgggcgg
accgggtcgatcgccgccgtgttcgaccgcatctgcgacgtcctcgtcacgctcgggtac
ctggagcgcacggaggcggaggccaccacgccgaccggcgggacggcactcgcggtgacc
gacgccggccagtggctgcggcggatctacgccgagaacgacctgctgctcgcggagtgc
ctgcgccgcggcgtgtgggaggagctggaccccccgcagctcgcggcggccgtctcggcg
ctcgtgtaccggtcgcggcgcgacgaggagatcgagccgcgtgtgccgggcgggccgcag
agccggttggggcgcgccctggacgcggcggtgcgtgcgtggtcggagctggaggacctc
gagcacggccaccgcctcgagacgatccagccgctcgacaccggcctggtcgagccgatc
caccgctgggcggcggggcgcagcctcgatgcggtcctgcgtggcggtgacctcgccgcc
ggcgacttcgtccgctgggtgaagcaggtggtcgacgtgctcgaccagatccacggtgcg
gcgcccaccgcgcggctgcggaccacggcggaccgcgccgtgacggccctgcgccgggga
gtggtggcgtactcggcggtgtga
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