Cellulomonas shaoxiangyii: E5225_10200
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Entry
E5225_10200 CDS
T05988
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
celz
Cellulomonas shaoxiangyii
Pathway
celz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
celz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5225_10200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
celz03019
]
E5225_10200
03400 DNA repair and recombination proteins [BR:
celz03400
]
E5225_10200
Enzymes [BR:
celz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5225_10200
Messenger RNA biogenesis [BR:
celz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5225_10200
DNA repair and recombination proteins [BR:
celz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5225_10200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
AAA_30
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QCB93875
UniProt:
A0A4V1CMR6
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All DBs
Position
2245385..2247547
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AA seq
720 aa
AA seq
DB search
MPASPPPDAAAPAAATAVDRVALRAQAEEVLRRLVGRDDARLHDDQWQAIEALVADHRRV
LVVQRTGWGKSAVYFVATALLRAGAGGARRGPTVIVSPLLALMRNQVESARRAGIAAETL
NSANVQDWADVHARVAAGEVDVLLVSPERLNNPGFRDEVLPRLAQDAGLVVVDEAHCISD
WGHDFRPDYRRIRTLLGDLPGGVPVLATTATANARVTADVAEQLGGDDDAPPLVLRGSLD
RPSLRLQVTQLPDVATRLAWLATTLPALEGSGIIYCLTIAAAEQVTEHLRSAGLDVRTYT
GQTDPAERETAEADLLANRVKALVATSALGMGFDKPDLAFVVHVGAPSSPIAYYQQVGRA
GRATARADVVLLPGQDDRAIWEWFASTAFPPEQEVRATLAALDAHGTLSTAHLETFVSLR
RTRLEGMLKVLDVDGAVRRVRGGWESTGEPWSYDAERYARVTAARRAEQATMLTYLTTDE
CRMAYLRAALDDPALEDGWRCGRCDTCTGTTVGEVPAEDAVASARDLLAVPGEPVSARRQ
WPTGLASLGLDLRGRLPAGEQVGEGRAVGRLDGLGWGGPLRAALRDEVPTELPVGLRGPV
RDVLEAWRPGVDVVVAVGSAGRGALVAHLAGGTARLLGVPWAGSLTAVGTPPRHDVNSAQ
RLADVIRHVELPDEVAEAVAGRRVLLVDDRTDTGWTLTVAGRLLRRAGATEVLPFVLGVG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcctctcccccgcccgacgccgcggcccccgccgcggcgaccgccgtcgaccgc
gtcgcgctgcgcgcgcaggccgaggaggtcctgcgccggctcgtcggccgggacgacgca
cgcctgcacgacgaccagtggcaggcgatcgaggcgctcgtcgccgaccaccgccgggtg
ctcgtcgtgcagcgcaccgggtggggcaagtcggcggtgtacttcgtcgccaccgccctg
ctgcgcgccggcgcggggggcgcccgccgcgggcccaccgtgatcgtgtcgccgctcctg
gcgctcatgcgcaaccaggtcgagtccgcccggcgtgcgggcatcgcggccgagacgctg
aactcggcgaacgtgcaggactgggcggacgtgcacgctcgcgtcgccgcgggcgaggtc
gacgtgctcctcgtctcgcccgagcggctcaacaacccgggcttccgggatgaggtgctg
ccccgcctcgcgcaggacgccggcctcgtcgtcgtggacgaggcgcactgcatctcggac
tggggccacgacttccggcccgactaccgccggatccgcacgctgctgggcgacctgccc
ggcggcgtccccgtgctcgccacgaccgcgacggcgaacgcccgcgtcacggcggacgtc
gccgaacagctcggtggtgacgacgacgccccgccgctcgtgctgcgcggctccctcgac
cgcccgagcctgcggctgcaggtcacgcagctgcccgacgtggcgacgcgcctcgcgtgg
ctcgccacgacgctccccgcgctcgaggggtccggcatcatctactgcctcaccatcgcc
gcggcggagcaggtcacggagcacctgcgttccgccggcctggacgtgcgcacgtacacg
ggccagaccgacccggcggagcgcgagaccgcggaggccgacctgctcgccaaccgcgtg
aaggcgctcgtcgcgacgtccgcgctcggcatggggttcgacaagccggacctcgcgttc
gtcgtgcacgtcggcgccccgtcgtcccccatcgcgtactaccagcaggtcggacgcgcg
ggccgcgcgacggcgcgtgccgacgtcgtcctccttcccgggcaggacgaccgggccatc
tgggagtggttcgcctccacggcgttcccgccggagcaggaggtccgcgcgacgctcgcc
gcgctggacgcgcacggcacgttgtcgacggcacatctcgagaccttcgtgagcctgcgc
cgcacgcggctcgaggggatgctcaaggtgctcgacgtcgacggcgccgtgcggcgcgtc
cgcggcggctgggagtcgacgggcgagccgtggtcgtacgacgccgagcgctacgcgcgc
gtgaccgccgcccgccgcgccgagcaggccacgatgctgacgtacctcaccaccgacgag
tgccgcatggcgtacctgcgcgcggcgctggacgacccggcgctcgaggacggctggcgc
tgcgggcggtgcgacacctgcaccggcacgacggtcggcgaggtccccgccgaggacgcc
gtcgcgtcggcgcgcgacctcctggcagtccccggggagcccgtctccgcccgccggcag
tggccgaccggtctcgcgtcgctcggtctcgacctgcgcgggcgcctgcccgccggcgag
caggtcggcgagggacgtgcggtggggcggctcgacgggctgggctggggaggtccgctg
cgtgcggcgctgcgcgacgaggtaccgaccgagctgcccgtcgggctgcgcggaccggtg
cgggacgtgctcgaggcctggcgtccgggcgtggacgtcgtcgtcgccgtcggctcggcc
ggccggggcgcactcgtcgcccacctcgcaggcgggacggcgcggctgctgggcgtgccg
tgggcaggctcgctcaccgcggtcggcaccccgccgcggcacgacgtgaactcggcccag
cggctcgccgacgtgatccgccacgtcgagctgccggacgaggtcgcggaggccgtcgcc
ggccgtcgcgtgctgctcgtcgacgaccgcaccgacaccggctggacgctgaccgtcgcg
ggccgcctgctgcgtcgtgcgggcgcgaccgaggtcctgccgttcgtcctcggcgtcggc
tga
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