Cellulomonas shaoxiangyii: E5225_10520
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Entry
E5225_10520 CDS
T05988
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
celz
Cellulomonas shaoxiangyii
Pathway
celz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
celz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5225_10520 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
celz03019
]
E5225_10520 (rny)
Messenger RNA biogenesis [BR:
celz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E5225_10520 (rny)
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH-I_KHDC4-BBP
KH_2
LMBR1
GA
Motif
Other DBs
NCBI-ProteinID:
QCB93932
UniProt:
A0A4P7SIL8
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Position
complement(2318779..2320311)
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AA seq
510 aa
AA seq
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MEQAAIVIVVGLLGACLVALMLVLVARREADARRRQAAEDVARIKDEARALLADAERRQQ
RIADRERELAGERSELGELERRTRAQADALAEAQRAGARTVDKAERTAARTLADAERAAN
ERLATAREQARQELEAVGGLTQDEARAELTRRITEQAANDAAAQVRRAEAGARRTADARA
RRIVTAAVQRLAVPTSAQHVVTILPLPSDEMKGRIIGKEGRNIRHFEALTGVNVLIDETP
DSVVLSSFDAERREVAQVALEALMADGRIHPQRIEAAYAEALAGADERHDAAGHDAAERA
GVDGLHPDLVRTMGRLRLRTSYGQNVLEHLVESALAAAVMAAELGADVDVARRGAFLHDV
GKALTAEVAGTHAAVGADLARRCGESDAVVNAIAAHHDEVPAATVEAVLVQAADAVSASR
PAARRQDVDQYVERMGSLEALVAGHDGVRRALAMAAGREVRVVVEPDEVTDRDLPQLATA
IARRIEADLTYPGEIKVTVVRELRASATAG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtggagcaggcagcgatcgtcatcgtcgtggggctgctcggcgcgtgcctcgtcgcgctc
atgctcgtcctcgtcgcacggcgggaggccgacgcccggcgccggcaggccgcggaggac
gtggcacggatcaaggacgaggcgcgcgcgctgctggcggacgccgagcggcggcagcag
cgcatcgccgaccgggagcgcgagctcgcgggggagcggtccgagctcggcgagctcgag
cgccggacccgcgcgcaggccgacgcgctcgccgaggcgcagcgcgcgggcgcccgcacg
gtcgacaaggccgagcggaccgcggcccgcaccctcgccgacgcggagcgagccgccaac
gagcggctcgccacggcgcgcgagcaggcacgccaggagctcgaggccgtcggcgggctc
acgcaggacgaggcccgtgcggagctgacgcgtcgcatcaccgagcaggccgccaacgac
gccgccgcccaggtccgccgcgccgaggcgggcgcgcggcgcacggccgacgcccgcgcg
cgtcgcatcgtcaccgcggccgtgcagcgccttgccgtcccgacgagcgcccagcacgtc
gtgacgatcctgccgctgccgtccgacgagatgaagggccgcatcatcggcaaggagggg
cgcaacatccgccacttcgaggccctcaccggggtcaacgtcctcatcgacgagacgccc
gactcggtcgtcctgtcctcgttcgacgccgagcgtcgcgaggtcgcccaggtcgcgctc
gaggcgctcatggccgacggccgcatccacccgcagcgcatcgaggcggcctacgcggag
gcgctcgccggtgccgacgagcggcacgacgccgcgggccacgacgccgccgagcgggcg
ggcgtcgacggcctccacccggacctcgtccgcacgatgggccgcctgcggctgcgcacg
tcctacggccagaacgtgctggagcacctcgtcgagagcgccctggccgcggccgtcatg
gccgcggagctcggcgcggacgtcgacgtggcccgccgcggcgcgttcctgcacgacgtc
ggcaaggccctgaccgccgaggtcgcgggcacccacgccgcggtcggtgcggacctcgcg
cgccgctgcggcgagtccgacgccgtcgtcaacgcgatcgccgcccaccacgacgaggtc
cccgcggcgaccgtcgaggcggtgctcgtgcaggcggccgacgccgtctcggcctcgcgt
cccgccgcccggcgccaggacgtggaccagtacgtcgagcgcatgggcagcctcgaggcg
ctcgtggcaggccacgacggcgtccggcgcgccctggcgatggcggccggccgggaggtg
cgggtggtcgtcgagccggacgaggtcacggaccgcgacctgccgcagctcgccaccgcc
atcgcgcggcgcatcgaggccgatctcacctaccccggggagatcaaggtgacggtcgtc
cgcgagctgcgcgcgagcgccacggccggctga
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