Cellulomonas shaoxiangyii: E5225_15305
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Entry
E5225_15305 CDS
T05988
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K20276
large repetitive protein
Organism
celz
Cellulomonas shaoxiangyii
Pathway
celz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
celz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5225_15305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
DUF11
HTH_23
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QCB94718
UniProt:
A0A4P7SLU2
LinkDB
All DBs
Position
complement(3429119..3433402)
Genome browser
AA seq
1427 aa
AA seq
DB search
MRGGTVAVMTRVRAPICAPSPDRLRRPAQFTRPVSSCASALVRARAAARWPGRRRRRSFR
ASSAGFIRSVGYGRLASKPDCDRSPGVVASAGTDGVIDDDAALLRATRAGDGSAFGHLYE
RHVGAALVVARQYTDSAPDAEDVVADAFAAVHRAIRGGAGPEVAFRAYLFTAVRRTATVH
RHAGRRVEPTDDVATLETAATPVDAAEAPALAGFERSVVARAFRSLPERWQAVLWHSEVE
GLTPAEIAPVLGLSANSTAALAYRAREGLRQAYLQQHLQDPLDDGCRSVAAKLGSYVRGG
LGTRDTAQVERHLDECGDCRALVLELGDVNHGMRAVVAPLVLGLLGVAALRHPLPVGGGV
AAGTAALAVQPAVGGAAGATAGGAAASGTAAGGGATAGLAAGAATAPAGVAAASGAAAAG
VAGAGVASAGAAAAAGGAGAAAAATGLTAVLGGMTATAAAVTVGAVAVVAATVVGAVQLL
GGPADGVAAPTASPTVSGSTLAPTADAATPTAEPTPTVSPTDLPTLPPAGDTDDTGDTGD
TGDTGDTDDTGAGGISEPGDDGPVLAGPPPDAADAPAPVPSAGPPPEPTPPPDPGPPPAP
DVVVEPPDGGIVLAAGSAGQELGLTVRNDGDRPAVDLRAEVTLPPGVRVDGIAGIIAVGA
GFAPLVTDGWVCAPAGEHQAACALPELPPRTAVRLVLRVSIDEAFVPADGLSVGLRITGA
TRVWAPPALPLVVAPSPARLVPAGQHAGVQLVAGRTRTTTLGLVNVGGSPVTADAPATVD
LALPRGVGAQAAAPWSCAPEDGTTRCRLPALGPREGTTLTLALTAAGGTAPAGGALEAVL
RPAAGRDAARTSVPYTVVRPAAPTLAVPGAVEVALGPATDVPVDVTNTGDLPATGVTVRL
TPPAGTPPAAADGCTSEGADVVCRLAEPLAPGATARVVARLTGAAGAVGPLGVVSVAVSA
DDADLPAPALVAVSGVAPVVTVSDAAAVADGDGGGVLAFVVGAAGPQHGRPGADAADVVA
RVTLPRGVTYDPDAVVPSTDGCAATDASGREVACDLGRVPAGTTLPVQLNVRVAGALHGT
AEIRVTGTGAAEATASVRVVASSANLTPVWSGLGDLDVVEVGAPLLVCRYGPTVPCPSVH
RADDNNGLDMRPLDDAPPPGPRSAVPVSSETRLALPAGRPVVWAGLYWSGVRGPEDGWTG
DLTTARLRAPDGTWTDVRVGADAVTQVADNAGRSYYQAAADVTDLVARGGAGAWALADAA
VSDARTDRDPTYYAGWSLVVVHGTEAADGASVTVHQGGAWIGRAAAAPAFAFVAEAGTRA
RIGVVAWEGDRGSGDDRLSLSGVGALTPLRWDGTQVVRGGSRANAFDSTATGWRYPNALG
VDAKGFEDVVLTSDVGTLTPTTSSDQYLIGVVTVRTVAPEGVSSRQR
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggcacggtcgcggtcatgacgcgggttcgggcaccgatctgcgcgccgtca
cccgatcggctcagacgaccggcccaattcacccgtccggtgtccagctgcgcgtccgcg
ctggtccgggcgcgcgccgcggcacggtggccgggacgccggcgccggcgatcgttccgc
gcgtcgtccgccgggttcatccgatcagtcggttatggcaggcttgcgagcaaaccagac
tgcgacaggagtcccggcgtggtggcttccgcgggcacggacggcgtcatcgacgatgac
gccgccctgctgcgcgcgacgcgggcgggcgacgggagcgccttcggccacctgtacgag
cggcacgtcggcgccgcgctcgtggtcgcgcggcagtacaccgactccgcgcccgacgcc
gaggacgtcgtcgccgacgccttcgccgcggtccaccgcgccatccgcgggggagcggga
cccgaggtcgccttccgcgcctacctcttcacggcggtgcggcgcaccgccacggtgcac
cgtcacgcgggccggcgcgtcgagccgaccgacgacgtcgcgacgctcgagaccgcggcg
acgcccgtcgacgcggcggaggcccccgcgctcgccgggttcgagcgcagcgtcgtcgcc
cgcgccttccgctcgctccccgagcggtggcaggcggtcctgtggcactccgaggtcgag
gggctgacgccggccgagatcgcccccgtgctcgggctgagcgccaacagcaccgcggcc
ctggcgtaccgcgcccgcgaggggctgcgtcaggcctacctccagcagcacctgcaggac
ccgctcgacgacggctgccgcagcgtcgcggccaagctcgggtcgtacgtgcgcggcgga
ctgggcacgcgcgacaccgcgcaggtcgagcggcacctcgacgagtgcggcgactgccgc
gcgctcgtgctcgagctcggcgacgtcaaccacggcatgcgcgccgtcgtggctccgctc
gtgctgggtctgctcggcgtcgcggcgctgcggcacccgctgccggtgggcggcggcgtg
gcggccggcacggcggcgctcgcggtgcagccggccgtgggcggtgcggcgggggcgacg
gccggcggtgcggcggcgagcgggacggccgcgggcggcggggcgacggcgggcctggcc
gcgggcgccgcgaccgcacccgccggcgtggccgcggcgagcggcgccgcggcggccggc
gtcgcaggggccggtgtcgcgagcgcgggtgccgcggctgccgccggcggcgccggtgcg
gcggccgcggcgaccggcctcacggccgtgctcggcggcatgacggccacggccgccgcc
gtgacggtcggcgcggtcgccgtcgtggccgcgaccgtggtgggggcggtgcagctgctc
ggtggcccggcggacggcgtcgccgcaccgacggcgagccccacggtgtccggcagcacg
ctggcgccgaccgccgacgccgccacgcccaccgcggagcccacaccgaccgtgagcccg
accgacctgccgaccctcccgccggcgggcgacaccgacgacacgggcgacacaggcgac
acaggcgacacaggcgacaccgacgacaccggcgcgggcggcatcagcgagccgggtgac
gacggccccgtgctcgcgggcccgccgcccgacgccgcggacgcccccgcgcccgtcccg
tccgccggcccgccgcccgagccgacaccgccgcctgaccccgggccgccacccgcaccg
gacgtggtcgtcgaaccgcccgacggcggcatcgtcctcgccgcgggcagcgccggtcag
gagctcggcctgacggtgcgcaacgacggcgaccgccccgccgtggacctgcgggcggaa
gtgacgctgccgcccggcgtccgcgtggacggcatcgccggcatcatcgccgtcggcgcg
gggttcgcgccgctcgtcacggacgggtgggtgtgtgcgcccgccggcgagcaccaggct
gcgtgcgccctgcccgagctgccgccccgcaccgcggtccggctggtgctgcgcgtcagc
atcgacgaggcgttcgtgcccgcggacggcctgagcgtcgggctgcggatcaccggcgcc
acgcgagtgtgggcaccgccggcgctgccgctggtcgtggcgccgtcgcccgcacggctc
gtgcccgccggccagcacgccggcgtgcagctcgtggccggccgtacgcggaccaccacg
ctcggcctcgtcaacgtcggcgggtccccggtcaccgccgacgccccggccacggtggac
ctcgccctgccccgcggcgtcggcgcccaggccgccgcgccctggtcgtgcgcccccgag
gacggcacgacgcggtgccggctcccggccctgggcccccgggagggcaccacgctcacc
ctcgcgctcacggcggcgggcgggaccgcgccggccgggggcgccctcgaggccgtcctg
cgcccggccgccggccgcgacgccgcccgcacgtccgtgccctacaccgtggtccggccc
gccgcgccgacgctcgccgtccccggtgccgtcgaggtggcgctcggacccgctacggac
gtccccgtcgacgtcaccaacaccggtgacctgcccgcgacgggcgtcaccgtgcgcctc
accccgccggccggcaccccgcccgcggcggccgacggctgcacgagcgagggcgccgac
gtcgtctgccggctcgccgagccgctcgcgcccggtgcgaccgcgcgcgtcgtggcgcgc
ctgaccggtgccgccggcgcggtcgggccgctcggcgtcgtgagcgtcgccgtgtccgcc
gacgacgccgacctgccggcgcccgcgctggtggcggtgtccggcgtcgccccggtcgtg
accgtgagcgacgccgccgcggtcgccgacggcgacggcgggggcgtgctcgcgttcgtc
gtgggggccgccgggccgcagcacggacgcccgggcgccgacgccgccgacgtcgtcgca
cgcgtgaccctgccgcgcggcgtgacgtacgaccccgacgccgtcgtcccgagcaccgac
ggctgcgccgccaccgacgcgtccgggcgtgaggtcgcctgcgacctcggccgcgtgccg
gcgggcacgaccttgcccgtgcagctcaacgtgcgtgtcgcgggtgcgctccacggcacg
gccgagatccgggtcaccggcacgggcgccgccgaggcgaccgcctccgtccgggtcgtc
gcctcgtcggcgaacctcacgcccgtgtggtcgggtctcggggacctcgacgtggtcgag
gtgggcgcgcccctgctggtctgccggtacgggccgaccgtgccgtgcccgtccgtgcac
cgcgccgacgacaacaacggcctcgacatgcgcccgctcgacgacgcgccgccgcccggc
ccgcggtccgccgtgccggtctcctccgagacgcgtctcgcgctgccggcgggccgcccg
gtcgtgtgggcagggctctactggtccggcgtgcgcggtcccgaggacgggtggaccggc
gacctgacgaccgcacgcctgcgcgcccccgacggcacctggaccgacgtgcgcgtcggc
gccgacgccgtgacgcaggtcgcggacaacgcgggacgctcctactaccaggcggccgcg
gacgtcaccgacctggtcgcgcgcggcggcgcgggggcgtgggcgctggccgacgcggcg
gtcagcgacgcgcgcaccgaccgcgaccccacctactacgccggctggtcgctcgtggtg
gtgcacgggaccgaggccgccgacggcgcctcggtgacggtgcaccagggcggtgcgtgg
atcggccgggcggccgcggcccccgcgttcgcgttcgtcgccgaggccggcacgcgtgcg
cgcatcggcgtggtcgcctgggagggcgaccgcgggtccggtgacgaccggctgtccctg
tcgggcgtcggcgcgctcaccccgttgcgctgggacggcacgcaggtggtccgcggcggc
tcgcgcgccaacgcgttcgactcgacggcgaccggctggcggtacccgaacgcgctcggc
gtcgacgcgaaggggttcgaggacgtcgtgctcacctcggacgtcggcacgctcacgccc
accacgtcgtccgaccagtacctcatcggggtcgtcacggtgcgcacggtcgcgcccgag
ggggtctcctcgcggcagcgctga
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