Cedecea neteri M006: LH23_04425
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Entry
LH23_04425 CDS
T03328
Name
(GenBank) selenocysteinyl-tRNA-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cem03012
]
LH23_04425
Translation factors [BR:
cem03012
]
Eukaryotic type
Elongation factors
LH23_04425
Prokaryotic type
LH23_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
bact_SelB_WH_2nd
SelB-wing_3
SelB-wing_1_3
SelB-wing_2
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
SRPRB
FeoB_N
eIF2_C
Motif
Other DBs
NCBI-ProteinID:
AIR59925
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Position
915334..917169
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AA seq
611 aa
AA seq
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MIIATAGHVDHGKTTLLQALTGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVIGFIDVPG
HEKFLANMLAGVGGIDHALLVIACDDGVMAQTREHLAILQLTGNPKITVALTKADRVSDS
RIAEVRDEVVTLLGKADAAIFVTAANSGEGVEALQQHLKGLGERPHATAHRFRLAIDRAF
TVKGAGLVVTGTALSGEVNIGDSLWLTGTEKPMRVRGLHAQNQPVTRAMAGQRIALNISG
DAEKTDISRGDWLLSEKPLQPVERVIVELQPLQPLQQWQPLHIHHSARHVTGRVSLLEGN
LAELVLDVPLWLADNDRLVLRDISARTTLAGARAVLLHAPRRGKRQPAFLSWLGELAAVT
DDQQALRTYLTRGAVLLNEFGWARQLTTQGLQALLAKPGYLQAGNALLSTDVAAIWQQKL
LDALARYHQQHDDQPGPGRERLRRMALPAEDEGLVLSLIEKMRGEGLLMSRQGWLHLPGH
EPGFSATQQAVWDKVDVLFGDEPWWVRDLAKETGEEEQAMRQLLRSAAQQGLVTAILKDR
YYRNDRLRAFADLIRELDQTHGATNAADFRDRLGVGRKLAIQILEYFDKIGFTRRRGNDH
LLRDKALFLSA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgattatcgccaccgccgggcacgtcgaccacggcaaaaccaccctgcttcaggcgctg
accggggtaaatgcagaccgcctgccggaagagaaaaaacgcggcatgaccatcgacctc
ggctacgcctactggccgcagccggatggccgggttatcggctttatcgacgtgccaggg
catgaaaagtttctggccaacatgctggcgggcgtcggcggcatcgatcatgccctgctg
gtcatcgcctgcgacgacggcgtgatggcgcaaacccgcgagcatctggcgattttacag
ctgacaggtaacccgaagattaccgtcgcgctgaccaaagccgaccgggtgagcgacagc
cgcattgcagaggtccgcgatgaagttgtcacgctgctgggtaaggcggatgccgctatt
tttgttaccgccgccaacagtggggaaggcgttgaagcgctacagcagcatctcaaaggg
ctgggcgaacgccctcatgccactgcacatcgcttccgccttgccatcgaccgtgccttt
acggtcaagggcgcaggactggtagtgaccggcacagcgctgagcggggaagttaatatc
ggtgattcactctggctgaccggcacagaaaaacctatgcgcgtgcgcggcctccatgct
caaaaccagccggtaacccgcgccatggccgggcagcgcattgcgttgaatatcagcggt
gacgcggaaaaaacggatatcagccggggcgactggctgttaagcgaaaaaccgctgcag
ccggttgagcgcgtcatcgtcgagctgcaacccctgcagccgctccagcagtggcagccg
ctgcatattcaccattctgcccgccacgtaaccgggcgtgtttccctgctcgaaggtaat
ttagctgagctggtgctggatgtgccgctgtggctggcggataacgaccgcctggtgctg
cgcgatatcagcgcccgcaccacgctcgccggggcccgtgccgtgctgctccatgcgcca
cgtcgtggtaaacgccagcccgctttcctgagctggctgggtgagctggcagcagtcacc
gatgaccaacaggcgttgagaacatatctgactcgcggagccgtgctgctcaacgaattt
ggctgggcgcgtcagctaacgacgcaagggcttcaggccctgcttgcgaagccaggctat
ttgcaggcaggcaacgcgctgctaagcacggacgtggccgctatctggcagcaaaaactg
ctcgatgcgctggctcgctaccaccaacagcatgacgatcagccggggccggggcgagaa
cgcctgcgccgcatggcgttgcccgcagaggacgaaggcctggtgctgtcactcatcgaa
aaaatgcgtggtgaaggcctgctcatgagccgccagggctggctgcatctgccggggcat
gagccagggttttccgcaacacaacaggccgtgtgggataaagtcgacgtcctctttggc
gacgagccgtggtgggtgcgcgacctggccaaagaaaccggcgaggaagagcaggccatg
cgccagctgctaagatccgccgctcagcaagggctggtcaccgcgattctgaaagatcgt
tattaccgcaacgatcgcctgcgggcgtttgccgatctgatccgcgagctggatcaaacc
cacggcgcgaccaacgccgctgacttccgcgacaggctgggcgtgggccgcaagctggcg
attcagattctggagtatttcgacaaaattggcttcacccggcgacgaggcaacgaccat
ctgctgcgcgataaggcgctatttttatcggcgtaa
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