Cedecea neteri M006: LH23_04710
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Entry
LH23_04710 CDS
T03328
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cem03016
]
LH23_04710 (trmE)
Transfer RNA biogenesis [BR:
cem03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LH23_04710 (trmE)
Prokaryotic type
Methyltransferases
LH23_04710 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
GTP_EFTU
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AIR59980
UniProt:
A0AAN0VSS4
LinkDB
All DBs
Position
977303..978667
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AA seq
454 aa
AA seq
DB search
MSNHDTIIAQATPPGRGGVGILRISGRQAREVAEAVLGKLPKPRYADYLPFRDADGSALD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGLRIANPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARINHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLHRVIGDLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWKEIEQADRVL
FMVDGTTTNAVDPATIWPDFIARLPERLPITVVRNKADVTGETLGLSEVNGHSLVRLSAR
TGEGVDVLRAHLKESMGFETNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFSSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcatgacactatcattgcccaggctactccgccggggcgtggcggcgtaggt
atcctgcgtatttccggccgtcaggcgcgcgaggtcgcggaggcggtgctcggtaagctg
ccgaagccacgctacgcggattaccttcccttccgtgatgccgacggtagcgcgctggat
cagggcattgcgctgtggtttcctggcccgaactccttcaccggtgaagatgttcttgaa
ctgcaggggcacggcggcccggtcattctcgacctgctgctaaaacgcattctgacgctg
ccgggtttacgcatcgccaatcccggtgagttttccgagcgcgcatttctgaacgataag
ctcgacctggcgcaggcagaagccattgccgacctgatcgatgccagctccgagcaggcc
gctcgctcagcgcttaattcgctgcagggagcgttctccgcgcgtattaaccacctggtg
gaagccctgactcacctgcgtatctacgtggaagcggctatcgacttcccggacgaagag
atcgacttcctctccgacggaaaaatagaagcccagttgcatcgggtcattggcgatctt
gacgcggtgcgcgccgaagcccgccagggcagcctgctgcgcgaaggcatgaaggtggtg
atcgccggacgccctaacgccggtaaatccagcctgctgaacgcgctggccgggcgcgag
gccgctatcgtcaccgatattgccggcaccacgcgtgacgtgctgcgcgaacatatccac
atcgacggcatgccgctgcatatcatcgataccgcaggcctgcgtgaagccagcgatgaa
gttgaacgcatcgggattgagcgtgcctggaaagagattgagcaggcggatcgcgtgtta
ttcatggtggacggcaccaccaccaacgccgttgacccggcgacgatttggccagatttt
atcgctcgtctaccggagcgtttgccgattaccgtggtgcgcaataaagcggacgtcact
ggagaaacgcttggcctgagcgaagtaaatggtcactcacttgtcaggctctccgcccgt
accggggaaggtgtcgacgtgctgcgcgcgcatctgaaagagagcatgggcttcgaaacc
aacatggaaggcggcttcctcgcccgccgccgtcacctgcaggcgctcgagcaagccgct
gaacacctgcaacagggcaaagcccaactgctgggtgcctgggctggcgaattgctggcg
gaagagctgcgtctggcgcaacagaacttaagtgaaatcaccggcgaatttagctctgac
gacctgttaggccgcatcttctcgagcttctgtatcgggaaataa
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