Cedecea neteri M006: LH23_04790
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Entry
LH23_04790 CDS
T03328
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LH23_04790
Enzymes [BR:
cem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LH23_04790
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AIR59995
UniProt:
A0AAN0VST4
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All DBs
Position
complement(995450..997435)
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AA seq
661 aa
AA seq
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MRVSRSLTIKQMAMVSAVALAFIFIFIVIQLFHFVQQNRYDTATQMEKIAHSVRLPLSEA
ILRADIPQAEAILHQIQPSGIISRADVVLPNQFQALRISFMPEHQIPMLITRVFELPVQI
SLPLYSLERPANPQPLAYLVLQADSWRMYRIIVSTISTLLTTYLLLALILTVAISWCINR
LVVHPIRKISRELDGLNPQQAGEHQLTLPPLHHDDEIGMLVRSYNRNQQVTQRLQQQMNS
LSTHNPVSELPNKALLMALIEQMVGNDKHGALILIGSETLQDAAGVLNEEQREMLLLTLV
EKIKPVLPTNAVLAQLSQNDFGLLLYGVSDPWNAMTLAQKIMETLNARLPIQALQLKPTA
SIGIAMFRGGLDAEQLYRRAASATLAARRFGKNQIQFFDPDQMEKAQRRLTEEHDILNAL
ERHHFAVWLQPQVDMRDGSVVSAEVLLRQRQHDGSWSLPEGLIERIEACGLMITVGNWIL
EESCRTLSAWQSRGITLPLCVNLSALQLLHEAMVPSLLELLGRYRIQPGTLILEVTESRR
IEDPQAAVNILRPLRQAGVRIALDDFGMGYASLHHLHHMKALPIDVLKIDKSFIEGLPED
NAMVGVIIAMAKALDLKVVAEGVEREAQREWLVQQGVIYAQGFLYAKAHTLEQFEREFLT
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagtcagtcgttccctaacgataaaacagatggctatggtgtcagccgtggccctg
gcgtttatttttatttttatcgtcattcagctgttccattttgtgcagcaaaatcgctac
gacaccgccacgcaaatggagaaaatcgcccactccgtgcgtcttccgctgtctgaggcc
attttgcgggctgacattccgcaggccgaggccattcttcatcagatccaaccctcgggc
atcatcagtcgagccgacgtcgtgctgccaaaccagttccaggcgcttcgcattagcttt
atgccggagcaccaaatcccgatgctcatcacccgcgtgtttgagctgccggtgcagatt
tccctgccgctttattctctcgaacgcccggcaaacccgcagccgctggcttatctggtg
ctacaggcggattcctggcgtatgtaccgcattatcgtcagcacgatttccactctgctg
actacctatttgctgctggcgctgattttgaccgtggcgatcagctggtgcattaaccgg
ctggtggtgcatccgatccgtaaaattagccgcgagctggatggccttaatcctcaacaa
gcgggcgagcatcagcttacgctgccgccgctgcatcatgacgatgagattggcatgctg
gtgcgcagctataaccgcaatcaacaggttacccagcgtcttcagcagcaaatgaattcg
ttgagcacccacaatccggtctctgagctgccgaataaggcgctgctgatggcgctgatt
gaacagatggtggggaacgataagcacggcgcattaatactgatcggcagcgaaacgctg
caggatgcggccggcgtgctgaatgaagaacagcgcgagatgctactgctgacgctggtc
gagaaaattaaacccgtgttgccgaccaatgcggtgctggcccagcttagccagaatgat
tttgggctgctgctctatggcgtcagcgacccgtggaatgccatgacgctggcacagaaa
atcatggaaacgctcaacgctcgtttgcccatccaggcgctacagttgaaaccgaccgcc
agcattggcatagcgatgttcaggggcggtcttgatgccgagcagctttatcgtcgggcg
gcttcggcaacgcttgcggcccgccgcttcgggaaaaaccaaattcagttcttcgacccc
gatcaaatggaaaaagcccagcgccgcctgaccgaagagcacgatattttgaacgcgctt
gagaggcatcattttgccgtctggctgcaaccgcaggtggatatgcgtgatggaagcgtg
gtcagcgccgaagtcctgctgcgccagcgccagcatgatggtagttggagtctgcctgaa
gggttgattgagcgcatcgaagcctgcgggctgatgattaccgttggtaactggatcctc
gaggagtcctgccgcaccctgtcagcctggcaaagccgggggattacgctgccgctgtgc
gtcaacctttccgcgctccagttgctgcatgaagccatggtgccttcactgttagagtta
cttgggcgttacagaatccagcccggcacgctgattcttgaagtgaccgaaagccgccgc
attgaagatccgcaggcggcggtcaatattctgcggccgcttcgtcaggccggggtgcgc
atcgcgctggatgattttggcatgggctacgccagccttcatcacctgcatcatatgaaa
gcgctgccgattgacgtgttgaaaatagataaaagctttatcgaagggctgccggaagat
aacgcgatggtgggcgtgattatcgcgatggccaaagcgcttgatctgaaagtcgtcgcg
gaaggcgtagagcgagaagcccagcgtgagtggttagtgcagcagggcgttatctacgcc
cagggcttcctgtatgccaaagcacacaccctcgagcagtttgaacgtgaatttcttact
gcgtaa
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