Cedecea neteri M006: LH23_05400
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Entry
LH23_05400 CDS
T03328
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cem
Cedecea neteri M006
Pathway
cem03030
DNA replication
cem03410
Base excision repair
cem03420
Nucleotide excision repair
cem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH23_05400
03410 Base excision repair
LH23_05400
03420 Nucleotide excision repair
LH23_05400
03440 Homologous recombination
LH23_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cem03032
]
LH23_05400
03400 DNA repair and recombination proteins [BR:
cem03400
]
LH23_05400
Enzymes [BR:
cem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH23_05400
DNA replication proteins [BR:
cem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LH23_05400
DNA repair and recombination proteins [BR:
cem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LH23_05400
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH23_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIR60113
UniProt:
A0AAN0S254
LinkDB
All DBs
Position
1133753..1136539
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIADNPLILVDGSSYLYRAYHAFPPLTNSRGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LALEAEKAGRPVLISTGDKDMAQLVTPGVTLINTMTNTILGPEEVLTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAHPEKIAELTFRGAKTMAAKLEQSK
ELAYLSYKLATIKTDVELELGCEQLEVQQPAAEELLTLFKQYEFKRWITDVEAGKWMQAK
GAKPAAQPLKAAEVEAEPEVPASQLSYDNYVTVLDESVLLEWIERLKKAPLFAFDTETDS
LDNVSANLVGLSFATEPGVACYIPVAHDYLDAPEQISRDRALELLKPLLEDEKALKVGQN
LKYDRGIMQNYGIELRGIAFDTMLESYTLDSVAGRHDMDSLADRWLKHQTISFEEIAGKG
KKQLTFNQIDLETAGRYAAEDADVTLQLHLKMWPKLEKVAGPLNIFKNVEMPLVPVISRI
ERNGVKIDPAILHAHSGELTKRLAELELKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMISPITGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVILSADYSQIELRIMAHLSRD
KGLLSAFAEGKDIHRATAAEVFGLPLESVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLEYMERTRAQAKDQGYVETLDGRRLYLPDINSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDGWLETDKPRVKMIMQVHDELVFEVHKDDVEAVSKKV
HELMESSMKLDVPLLVEVGSGKNWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggtccagatcgcagacaacccgcttatcctcgttgatggctcttcctatctttatcgg
gcatatcacgccttcccaccgttgacgaacagccgtggcgagccaacaggggcgatgtac
ggcgtgctgaacatgctgcgtagcctgattttgcaataccagccgacgcacgctgccgtg
gtgtttgatgccaaaggcaaaacgttccgtgatgagttgtttgaggactataaatcgcac
cgccccccaatgccggacgatctcagagcgcagattgaacctctgcacgcgatggttaaa
gcgatggggctgcctttactggccgtctcaggcgttgaagccgatgacgttattggtacg
ctggcgctggaggctgaaaaagcaggtcgcccggtgctgatcagtaccggtgataaagac
atggcgcagctggtgacgccgggcgtgacgctgattaacaccatgaccaataccatcctt
gggccagaagaggtactgaccaaatacggcgtacctccggagctgataatcgacttcctg
gcgctgatgggtgactcttcggacaacattcctggcgtaccgggcgtgggtgaaaaaacg
gctcaggcactgcttcaggggctgggtgggctggacacgctttacgcccaccctgaaaaa
attgccgaacttaccttccgtggtgcgaaaaccatggcagctaagctagagcaaagcaaa
gagctggcttatctctcctataagctcgccaccattaagaccgacgttgagctggagctg
ggctgtgagcagcttgaagtccagcaaccagcggcagaggaactgctgacactcttcaag
cagtacgaatttaagcgctggataaccgacgtagaagcaggcaaatggatgcaggctaaa
ggagccaaaccggccgcgcagcctctgaaagccgctgaggttgaagccgagcctgaagtg
ccagccagccagctctcttatgacaattacgtcactgtcctggatgagagcgtactgctt
gaatggattgagcggctgaaaaaagcgccgctgtttgcgtttgataccgagaccgacagt
ctggataacgtcagcgctaacctggtggggctttcctttgccaccgaaccgggtgtggcc
tgctatatccccgttgcacatgactatctcgatgcgccggagcaaatttctcgcgatcgc
gcgctggagctacttaagcccctgctggaggacgagaaagcgctgaaagtcgggcaaaac
ctgaaatacgatcgtggcatcatgcagaactatggcattgagctgcggggcatcgctttt
gacaccatgctggaatcttacacgctggacagcgtcgcaggccgccatgatatggacagt
ctggccgatcgctggttgaagcaccaaaccatctcgtttgaagagattgccggcaaaggc
aaaaaacagctgacctttaaccagatcgatttggaaactgccgggcgctatgcggcagaa
gatgccgacgtcaccctgcagctgcatttgaagatgtggccgaagctcgagaaggttgcg
ggcccgctgaacatctttaaaaacgtcgaaatgccactggtaccggtgatttcacgcatt
gaacgcaatggcgtgaaaatcgacccggctattttgcacgcgcattctggtgagctgact
aagcgcctggcagaacttgaactcaaagctcatgaaatcgccggagaagaattcaacctc
tcttccacaaagcagctgcaaaccattctctttgaaaaacagggtattaagccgctgaag
aaaacgccgggcggcgcgccgtcgacgtccgaagaggtgcttgaagagctggctctggat
tacccactgccgaaagtgatcctggaataccgtggtttggcgaagctgaaatccacctac
actgacaagttaccgctgatgattagcccgataaccgggcgcgtgcatacgtcttatcac
caggctgtcacggccaccgggcgtttgtcttcgaccgatcctaacctgcagaacattcct
gtgcgcaacgaagaagggcgtcgtattcgtcaggcctttattgcgcctgaagattacgtg
attctttctgcggactactcgcaaattgaactgcgcatcatggctcatctctctcgcgat
aaaggcctgttaagcgcctttgccgaaggcaaagatatccaccgcgccaccgctgcggaa
gtatttggtctgccgcttgaaagcgtcaccggtgagcagcgtcgcagcgcgaaagcgatt
aactttggtttgatctacggcatgagcgcctttggtctttcccgccagctcaatattccg
cgcaaagagtcccagaagtatatggatctctacttcgagcgttatccgggcgtgctggag
tatatggagcgtacgcgtgctcaggcgaaagatcagggctatgttgaaacgctggatggc
cgccgtctttacctaccggacatcaattccagcaacggcgctcgtcgtgccggcgcggag
cgtgcggcgattaacgccccgatgcagggtaccgctgccgacattatcaagcgcgcgatg
atcgccgtcgacggctggctggagacagacaagccacgagtgaaaatgatcatgcaggtg
cacgatgaactggtgttcgaagtgcacaaagacgacgtggaagcggtgtcgaaaaaggtg
catgagctgatggaaagcagcatgaagctcgacgtgccgctgctggtggaagtgggcagc
ggtaaaaactgggatgaggcgcattaa
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