KEGG   Cedecea neteri M006: LH23_05995
Entry
LH23_05995        CDS       T03328                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
cem  Cedecea neteri M006
Pathway
cem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LH23_05995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cem03019]
    LH23_05995
Enzymes [BR:cem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LH23_05995
Messenger RNA biogenesis [BR:cem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LH23_05995
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 ERCC3_RAD25_C CCDC138_C
Other DBs
NCBI-ProteinID: AIR60226
UniProt: A0AAN0S2I8
LinkDB
Position
complement(1264072..1265340)
AA seq 422 aa
MSKTHLTEKKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLANRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPVPENRQVNQPRALIMAPTRELAVQIHSDAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPVTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQRTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEDYALNLSAIETYIGHAIPVSKYNAEALLNEFPPPKRLTRSRPGNGPRRGGAPRGNRRR
AG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttgaccgaaaagaagttttccgacttcgccctgcaccctaaggtg
attgaagcccttgaaaataaagggttccataactgcaccccaattcaggcactggcactt
ccgctgactctggcgaatcgtgacgttgcagggcaggcgcaaaccggtacaggcaaaacg
atggcgtttctgacgtccacgttccactatttactttctcacccggttccagagaaccgt
caggtgaatcaaccacgcgccttgattatggcgccaacccgcgaattagcggtacagatt
cactctgatgcggaaccgttagctcaggcgactggcctgaagcttggccttgcctatggt
ggcgacggctatgacaaacagctgaaagtgctggaaagcggcgtcgatattttgatcggt
accaccggccgactgattgactacgccaaacaaaatcacattaacctgggcgcgattcag
gttgtggtcctggatgaagccgatcgcatgtacgatctcggctttattaaagatattcgt
tggctgttccgccgcatgccgccggtcactcagcgcctgaatatgctgttctcagccaca
ctttcctaccgcgtacgtgaactggctttcgagcagatgaacaacgcggaatatgtggaa
gttgagcccgagcagagaacgggtcaccgcattaaagaagagcttttctatccttctaac
gaagagaaaatgcgtctgctgcaaacgctgctcgaagaagaatggccagaccgcgccatc
atcttcgcgaacaccaaacaccgctgtgaagatatctggggccatctggccgctgatggt
catcgcgttgggctgttaacgggtgatgtcgcacagaaaaaacgcctgcgcatcctggaa
gagtttacccgtggcgatctggatattctggttgcaactgacgttgcggctcgtggcctg
catattccagccgttactcacgtcttcaactacgatttgccggacgactgcgaagactac
gtccaccgtattggtcgtaccggtcgtgccggggcaagcggtcattcgatcagcctcgca
tgcgaagattacgccctgaacctgtcggcaatcgaaacctatattggccacgccattccg
gtgagcaaatataacgctgaagcactgttaaatgagttcccaccgccaaaacgtctgacc
cgcagccgcccaggcaacggtccacgccgcggtggcgctcctcgtggtaatcgtcgtcgc
gcaggttaa

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