Cedecea neteri M006: LH23_06550
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Entry
LH23_06550 CDS
T03328
Name
(GenBank) transcriptional repressor IclR
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cem03000
]
LH23_06550
Transcription factors [BR:
cem03000
]
Prokaryotic type
Helix-turn-helix
IclR family
LH23_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
Rrf2
HTH_24
HTH_Crp_2
Dimerisation
HTH_20
TrmB
Motif
Other DBs
NCBI-ProteinID:
AIR60319
UniProt:
A0AAN0S2T3
LinkDB
All DBs
Position
complement(1380886..1381719)
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AA seq
277 aa
AA seq
DB search
MVATVPAKRGKKPRAAAAAAPAATGQVQSLTRGLKLLEWIAESHGSVALTELAQQAGLPN
STTHRLLTTMQQLGFVHQVGDLGHWTIGAHAFVVGSSFLQSRNLLAIVHPILRKLMEASG
ETVNLAVLDKSDHQAIIIDQVQCTQLMRMSAPIGGKLPMHASGAGKAFLAQLNDDELAGL
LHRKGLHSYTPATLTSPLHLKEDLAQTRKRGYSFDDEEHALGLRCVASCIYDEHHEAFAA
ISISGPISRITDDRVTELGALVIKAAKEITLAYGGGR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggttgctacagtccccgctaaacgaggtaagaaaccccgcgccgcagccgctgcggct
ccggctgctaccgggcaagtgcagtccctgacccgcggccttaagctgctggagtggatc
gccgaatctcacggtagtgtggcgctcaccgagcttgcccagcaggctggtttgcccaat
tccaccacccaccgcctgctcaccacgatgcagcagttaggctttgtgcatcaggtgggc
gatcttggccactggacgattggcgcgcacgcatttgtcgtcggcagcagcttcctgcaa
agccgcaatctgctggccattgtgcacccgattctgcgcaaactgatggaagcctccggt
gaaaccgtcaacctcgcggtgctcgacaagagcgatcaccaagcgattattatcgaccag
gttcagtgcacgcagctgatgcgtatgtcggcgcccattggcggcaagctgccgatgcac
gcgtccggtgcgggcaaggcgtttctggcccagcttaacgacgacgaactggccggcctg
ctgcaccgcaaaggcctgcacagttacacgccggcaacgctgacttcgccgctgcatttg
aaagaagatttagcgcaaacccgcaagcgtggttattcgtttgacgatgaagaacatgcg
ctggggctgcgttgcgtagcctcgtgcatctacgatgaacatcatgaagcgtttgcggcg
atctccatttctggcccgatttcacgcatcaccgatgaccgagtaacggagctgggtgcg
ctggtgatcaaagcggcgaaggaaattactctggcttacggcggcgggcgctag
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