Cedecea neteri M006: LH23_06580
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Entry
LH23_06580 CDS
T03328
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cem03000
]
LH23_06580
Transcription factors [BR:
cem03000
]
Prokaryotic type
Other transcription factors
Others
LH23_06580
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
MCM
AAA_22
AAA_19
NACHT
AAA_2
AAA_7
AAA_14
AAA_30
T2SSE
ABC_tran
AAA_33
ATPase_2
NPHP3_N
TsaE
AAA_25
AAA_18
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIR60325
UniProt:
A0AAN0VT68
LinkDB
All DBs
Position
complement(1389839..1391416)
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AA seq
525 aa
AA seq
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MKKRRVVIGVLGTVLDKRGKRANRFHKWRPTVGLCQQPDFPVDRLELLYQPKDSGMAEQL
SDDIARVSPDTDVRRHQVIIKDPWDFEEVYAAFLDFATRYDFDTANEEYLVHITTGTHVA
QICWFLLTEARYLPASLLQTGPARKGTPEEGSPAGTYSVIDLDLSRYTTLTSRFQREQQQ
SISFLKAGIDTRNTTFNQLIDRIERVALRSTAPVLLTGPTGAGKSFLAKRIYQLKQARHQ
VAGKLVAVNCATLRGDNAMSTLFGHVKGAFTGALTARTGLLREADGGVLFLDEIAELGLD
EQAMLLKAIEEKTFFPFGSDKEVQSDFQLIAGTHRDMRQWVTEGRFREDLYARINMWSFA
LPGLAQRREDIPPNVEYELQRFSSEAQAQVRFDKEARDHYLNFACSAQAQWRGNFRELSS
SVSRMATLAEQGRITLEAVKEEIVQLKESWQITSPDMAPNPDIDLFDQRQLETVLEVCRR
TQSLSEAGRELFAVSRLKKANPNDADRLRKYLARFNLSWDSAHGG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacggcgtgtggtgattggcgtactgggcacggtgctggataaacgcggcaag
cgggcaaatcgcttccataaatggcggccaacggttggcctgtgccagcagccggacttc
cccgttgatcggctcgagctgctgtatcagccgaaagactctggcatggcggagcagtta
tcggacgatatcgctcgcgtttcgcctgatacagacgtccgccggcatcaggtcattatc
aaagatccctgggactttgaagaggtgtatgccgccttccttgattttgccacccgttac
gatttcgataccgctaacgaagagtatttggtgcacatcaccaccgggacacatgtcgca
caaatttgctggtttctcctgacggaggcgcgctacctccccgccagcctgctgcaaacc
ggcccggcccggaaaggcaccccagaagaaggctcccccgcaggtacctactcggttatc
gatctcgatttaagccgctataccaccttaaccagccgctttcagcgggagcagcaacag
tcgatttctttcctgaaagcgggcatcgacacgcggaataccacgtttaaccagttgatc
gatcgcattgagcgagttgcgctccgttccacggcccccgtgctgctgactggcccaacc
ggggcgggtaaatctttcctggcaaaacgcatttaccaactcaagcaagctcgccatcag
gttgccggcaagttggtcgcggtaaactgcgccacgctgcgaggcgataacgcaatgtcc
acgttattcgggcatgtaaaaggggcgtttacgggcgcgcttacggcacgaacgggcctc
ttacgtgaggccgatggcggcgtgctatttttggatgaaatcgctgagctagggttggac
gaacaggccatgctactgaaagcgattgaagaaaaaacgtttttcccgtttggttccgat
aaagaggtacagagcgattttcagctaatcgccggcacccaccgggatatgcgccagtgg
gtcacagagggacgctttcgcgaagatctctatgccaggattaacatgtggagctttgct
ctgccgggcctggcgcagcggcgggaagacattccacccaacgtagagtacgaactacag
cgcttctcttccgaagcccaagcgcaagttcgttttgataaagaggccagggaccattat
ctgaattttgcctgttctgcacaggcacaatggcgcggaaacttccgtgagctgagctcc
tccgtatcacgcatggcaaccctggcggaacaaggacggataacgctggaggccgttaag
gaggagatcgtgcagcttaaggaaagctggcaaatcacctctcctgatatggcgcctaat
ccagacatagatttattcgatcaacgtcagctggaaaccgtgctggaggtttgccgccgc
acccagtcactttccgaggccgggcgcgaactttttgccgtctcgcggctgaaaaaggct
aacccgaatgatgctgaccgcctgcgtaaatatctggcacgttttaacctgagctgggac
agcgcccacggaggctaa
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