Cedecea neteri M006: LH23_08275
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Entry
LH23_08275 CDS
T03328
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cem
Cedecea neteri M006
Pathway
cem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH23_08275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cem03400
]
LH23_08275
Enzymes [BR:
cem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
LH23_08275
DNA repair and recombination proteins [BR:
cem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH23_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIR60652
UniProt:
A0AAN0VSX0
LinkDB
All DBs
Position
1734862..1735368
Genome browser
AA seq
168 aa
AA seq
DB search
MVSDILQPDLRVVFCGINPGKSSAHLGLPFAHPANRFWKVLHLAGFTDRQLKPEEAQLLL
SYGCGVTKLVERPTVQASEVALQELRDGGRELITKMQEYQPGALAILGKQAFEQAFRQRG
AKWGRQEVTLGDTEVWILPNPSGLSRITVDNLVEAYRELNESLTVRGR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggttagcgatatccttcagcctgaccttcgggtcgtgttttgcggtattaatccggga
aaatcatccgctcatctcgggctgccttttgcgcatcctgccaatcgcttctggaaagtg
cttcacctcgcgggatttacagaccgacagcttaagcctgaggaggcgcaattgcttctt
tcctacggctgcggcgtgacgaaactggttgagcggccaacggttcaggcaagcgaagtg
gcgctacaggagctgcgtgacggtgggcgagagctgatcacgaagatgcaggagtaccag
ccgggagcgctggcgatcctgggcaagcaggcgtttgagcaggctttccggcagcgtggt
gcgaagtggggaaggcaggaagttactctgggtgataccgaggtatggattttgcctaac
ccgagcggcttgagccgcatcacggtggataatctggtggaggcttatagagagctgaat
gagtcgctgacggtgcgtgggcggtaa
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