Cedecea neteri M006: LH23_08810
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Entry
LH23_08810 CDS
T03328
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cem03021
]
LH23_08810
Transcription machinery [BR:
cem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LH23_08810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AIR60754
UniProt:
A0AAN0S3L0
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All DBs
Position
complement(1848790..1851696)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYARNDSPITRVMFNPGDV
ITSHEGWQLKVDEVKEEKGLLAYFGTRLDTEEQEVLLREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQSRQIWSGLRGMRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGSAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DSSNPFDTEQLVICSLDFVRRNKQRLENLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAMFVDEQQNYRPVADAVALLL
AGDHLTDEQLNTMGELIGEQDIEPLLQTANSDREGSEAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMAARKSVEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVDWYHAGLDAFEHTCPTGRTIYDSVYPQLIEYLAAPENT
EGFDALIKQCREQHDALKQQLEQGRDRLLEIHSNGGEKAQALAEAISEQDNDTNLVSFAM
NLFDIVGINQDDRGDNMVVITPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFVTWE
HPIIRNGLDLILSGDTGSCALSLLKNKALPVGTLLLELIYVVEAKAPKQLQLNRFLPPTP
VRMLVDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQSDVHAILQVAEEKVADAAQ
ALIDAAREEADEKLSAELSRLEALKAVNPNIRDDELAAIETNRQQVMEALSQANWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgttggatcagcgataccgaaagcgaactgggactggga
accgtggtggcgctggatgcgcgtatggttaccctgctcttcccggcaacgggtgaaaat
cgtctgtacgccagaaatgactccccgatcacccgcgtgatgtttaacccaggcgatgtg
attaccagccatgaaggctggcagctgaaagttgatgaagttaaggaagaaaaggggtta
ctcgcctacttcggcacccgtctcgataccgaagaacaagaggttctgctgcgcgaagtg
ttcctcgacagcaaactggtcttcagcaagccgcaggatcgtctgtttgccgggcaaatc
gaccgtatggaccgttttgcgctgcgtttccgcgcccgcaaataccagagtgaacagtcg
cgccagatttggagcggccttcgcgggatgcgcaccagcctgatccctcaccagctaaac
atcgctcatgacgttggccgccgccatgcgccgcgcgtattgctcgcggatgaagttggc
ctgggtaaaaccattgaagccgggatgatcatccaccagcaactgctggccggcagtgcc
gaacgcgttctgattgtggtgccggaaaccctgcagcatcagtggctggtcgaaatgctg
cgtcgctttaacctgcgcttcgcgctgtttgacgatgaacgttacgcggaagcccagcac
gacagcagtaacccgtttgacaccgaacaattggtcatttgttcgctggacttcgtgcgc
cgcaataaacagcgcctggaaaacctctgcgaagcggagtgggatctgctggttgtcgat
gaggcccaccacctggtgtggagcgaagacgcgcctagccgtgaatatcaggcgattgaa
caactggccgagcatgtacccggcgttctgttgctgaccgccacgcctgaacagctgggc
atggaaagccacttcgcgcgcttacgcctgctggatccaaatcgcttccatgatttcgct
atgttcgtcgacgagcagcagaattatcgcccggtcgcagacgccgttgctttgctgctg
gcgggtgaccatctgaccgatgagcaactgaataccatgggtgagctgatcggcgagcag
gatatcgagccgctgctgcaaaccgccaacagcgatcgcgaaggcagtgaagccgcacgc
caggagctggtctccatgctgatggacaggcacggcacaagccgcgtgctgttccgtaac
acccgtaacggcgtgaagggtttcccgaaacgcgaactgcacaccattcgtctaccgctg
ccaacccagtaccaaacggcgattaaagtctccggtattatggccgcgcgtaagtccgtg
gaagatcgcgcccgcgacatgctgtacccggagcagatttatcaggaattcgaaggcgac
accggcacctggtggaacttcgacccgcgcgttgaatggctgatgggttacctgaccagt
caccgttcgcagaaagtgctggtgatctgcgccaaagccgcaacggcgcttcagctggag
caagttctgcgcgagcgcgaaggcatccgcgccgccgtcttccatgaaggcatgtccatc
atcgaacgcgaccgcgctgcagcctggtttgcggaagaagataccggtgcacaggttctg
ctctgctccgaaattggctcagaaggccgtaacttccagttcgccagccagctggtcatg
tttgacctgccgtttaacccggacctgctggaacagcgtattggtcgtctcgaccgtatt
ggccaggcacacgacatccagatccacgttccgtacctggaaaaaaccgctcagtcggtc
ctggtggactggtaccatgccggtctggatgccttcgagcatacctgcccgaccggccgc
accatctatgacagcgtctatccgcagctgatcgaatatctcgcggccccggaaaatacc
gaaggctttgacgcgctgatcaagcagtgccgcgagcagcacgatgcccttaaacagcag
cttgagcagggccgcgaccgtctgctggaaattcactccaacggcggtgaaaaagcgcag
gcgctggcagaagccatttccgagcaagataacgacactaacctcgttagctttgcgatg
aacctgtttgatatcgtcggcattaaccaggacgatcgcggcgacaacatggtcgtgatt
acgccgtccgaccatatgctggtcccggacttcccgggcctgccggaagacggctgcaca
atcaccttcgagcgtgacgtagccttatcccgcgaagacgcgcagtttgtgacctgggaa
cacccgatcatccgcaatggcctggatttgatcctgtcaggcgataccggtagctgtgcc
ctgtctctgctgaaaaacaaagcgctgccggtgggtacgctgctgctggagctgatttac
gttgttgaggccaaagcgcctaaacagctacagctcaaccgcttcctgccgccgacgccg
gtgcgcatgctggtggataaaaacggcaccaacctcgcggcgcaggtggagtttgaaagc
tttaaccgccagctcagcgcggttaaccgtcataccggcagcaaactggtgaatgcggtg
cagtccgacgtgcacgctattctgcaggtggcggaagagaaagttgccgatgcggcacag
gcgctgatcgacgcagctcgtgaagaagccgatgagaagctgagcgctgagctgtcccgt
ctggaagcgttgaaagccgttaacccaaacattcgtgacgacgaacttgcggctattgaa
accaatcgccagcaggtgatggaagcgctgagccaggctaactggcgtcttgatgccctg
cgtttgattgttgtgacgcaccagtaa
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