Cedecea neteri M006: LH23_09345
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Entry
LH23_09345 CDS
T03328
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cem
Cedecea neteri M006
Pathway
cem03030
DNA replication
cem03430
Mismatch repair
cem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH23_09345 (dnaE)
03430 Mismatch repair
LH23_09345 (dnaE)
03440 Homologous recombination
LH23_09345 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cem03032
]
LH23_09345 (dnaE)
03400 DNA repair and recombination proteins [BR:
cem03400
]
LH23_09345 (dnaE)
Enzymes [BR:
cem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH23_09345 (dnaE)
DNA replication proteins [BR:
cem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH23_09345 (dnaE)
DNA repair and recombination proteins [BR:
cem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH23_09345 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIR60860
UniProt:
A0AAN0S466
LinkDB
All DBs
Position
1974770..1978252
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGSGHGA
GIKPIIGADFNVANELLGDELSHLTVLAANNEGYQNLTLLISRAYQRGYGAAGPIIDREW
LVELNEGLILLSGGRMGDIGKSLLRGNQPLVDQCLEFWQQHFADRFYLELIRTGRVDEEN
YLHAAVALADERGLPVVATNDVRFIDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGEMTTEDFLVMKSKEGL
EERLEFLFPEPEVRAQKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVSE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDDQGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDVEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLSPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGHFLDLFDLCARSDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
ALGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEKSYASVIPWPEQVVLEGERETLGLY
LTGHPINQYLKEIERYVGGMRLKEMHPTERGKMTTAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIVSGQVSFDDFSGGLKMTARELMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRVDARARLRFGATWRVSPSD
RLLNDLRTLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcattcaccttcgggtgcacagcgactattccatgattgatggg
ctggctaagaccgggccgctggtaaaaaaagccgcggcgctggggatgcctgctctcgct
atcaccgatttcaccaacctctgtggtttggtcaaattctacggttctggtcacggagcc
ggtatcaagccaatcataggggcggacttcaacgttgccaatgaactgctgggcgatgag
cttagccatttgacggtgctggcggcgaataatgaaggctatcaaaacctcactttactg
atctctcgtgcctaccagcgtggctacggcgcagcgggcccgattattgaccgcgaatgg
ctggtcgagctaaacgaagggctgattctgctctccggcgggcgcatgggagatattggc
aaaagtctgcttcgtggaaaccagccgctggtcgatcagtgcctggaattctggcagcag
cattttgccgatcgcttctatctggaactgattcgcaccggccgtgtggacgaagagaac
tatcttcacgccgctgtggcactggctgacgaacgcggcttgccagtggttgccactaac
gatgtccgctttattgatgccggtgactttgatgcccacgagatccgcgtggcgatccac
gacggtttcacgctggacgatcccaagcgcccgcgcaactactccgcccagcaatatatg
cgtagcgaagaagagatgtgcgagctgttttcggacatcccggaagcgctggaaaacagc
gttgagattgccaaacgctgcaacgttaccgtgcgcctgggcgagtacttcctgccgcag
ttcccgacgggagagatgaccaccgaagacttcctggtcatgaaatcgaaagaggggctg
gaggaacgtcttgagttcctgttcccggaaccagaagtgcgtgcgcagaagcgccctgag
tacgacgagcgcctggatatcgagctgcaggttatcaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacggcgtgccggtcgggccg
ggccgcggttccggtgcgggttcgctggtggcctatgcgctgaaaatcaccgatctcgat
ccgcttgagtttgacctgctgttcgaacgattccttaacccggaacgtgtttcgatgcct
gacttcgacgtcgatttctgcatggaaaaacgcgaccaggtgatcgaccacgtttccgaa
atgtatgggcgcgaagcggtttcccagattattaccttcggtacgatggcggcgaaggcg
gttattcgtgacgtaggtcgcgtactcggtcacccttacggctttgtcgatcgtatttcc
aaactggtgccaccggatcccggcatgacgctggcaaaagcttttgaggcggagccgcaa
ctgccagagatctatgaggctgacgaagaagttaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgtaacgccggtaagcatgccgggggtgtggttatcgccccaacc
aaaattacagattttgcgccgctttattgtgacgatcaggggcagcacccggttacccag
ttcgacaagaacgacgttgaatatgcgggcctggtgaagtttgacttcctggggctgcgt
acgctgacgatcatcgactgggcgctgaaaatgatcaacccgcgtcgggcaaaacagggg
ctggagccgattgatatcgccgccatcccgctcgacgataagaaaagcttcgacatgctg
cagcgctcggaaaccaccgcggtcttccagcttgaatcccgcggtatgaaagacctgatt
aagcgcctgcagcctgactgtttcgaagacatgatcgcccttgtggcacttttccgtccg
ggcccgctacagtcgggcatggtagataacttcatcgaccgtaagcacgggcgtgaagcg
atttcttatccggacgtggaatggcagcacgaaagcctgaaaccggtactggagcccacc
tacggcatcatcctgtatcaggaacaggttatgcagattgcccaggtgctttccggttat
accctcggtggcgcggatatgctgcgtcgtgcgatggggaaaaagaaaccggaagagatg
gccaagcagcgcggcacctttgaagagggcgcgatcaaaaacggcgtcgacggcgagctg
tcgatgaaaatctttgacctggtagagaaatttgccgggtacggctttaacaaatctcac
tccgctgcctatgctttggtttcgtaccagacgctgtggctgaaagcgcactacccggca
gagtttatggcggccgtgatgaccgccgatatggataacaccgagaaagtggtgggcctg
gtggatgagtgctggcgcatggggctgaaagtcctgtcgccggatattaactctggtctt
taccatttccacgttaacgatgacggggaaattgtttacggcatcggcgcgataaaaggc
gtgggcgaaggcccgattgaagccattatcgaagcgcgtaatcagggcgggcatttcctc
gatctctttgatttgtgtgcgcgctccgatatcaaaaagcttaaccgccgggtgctggaa
aaactcattatgtccggggcttttgaccgccttgggcctcaccgcgcggcgctgatgaat
gcgctgggtgatgcgttaaaagccgctgaccagcacgcgaaagcggaagctattggccag
gccgatatgttcggcgttctggcggaagagcccgagcaggtcgaaaaatcctacgccagc
gtgattccctggcctgaacaagtggtgctggaaggggagcgtgagacgcttgggctgtat
cttaccggccacccgattaatcagtacctgaaagaaattgagcgctatgtaggtggcatg
cgcctgaaagagatgcacccgacggaacgtggtaaaatgaccacggctgcgggtctggtg
attgcttcgcgggttatggtcaccaagcgaggtaatcgcatcggcatctgtacgctggat
gaccgctctggtcgtctggaagtgatgttattcacagatgcgctagaaaaataccagcat
ctgctggaaaaagaccgtatcctgatcgttagcggacaggtcagctttgatgacttcagc
ggagggcttaaaatgacggcccgcgagctgatggacatcgacgaagcccgtgaaaagtac
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcagtctctggaaccccatcgttcggggacaattccagtacatctctactatcag
agggtggatgcacgagcccggttgcgcttcggtgcaacatggcgtgtttcccctagcgat
cgtttacttaacgatctgcgaacgctgattggttcggagcaggtggaactggagtttgac
taa
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