Cedecea neteri M006: LH23_11165
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Entry
LH23_11165 CDS
T03328
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
cem
Cedecea neteri M006
Pathway
cem02020
Two-component system
cem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH23_11165
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LH23_11165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cem03021
]
LH23_11165
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cem02035
]
LH23_11165
Transcription machinery [BR:
cem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LH23_11165
Bacterial motility proteins [BR:
cem02035
]
Flagellar system
Flagellar assembly proteins
Stator
LH23_11165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_38
HNH_repeat
UPF0122
HrpB7
Motif
Other DBs
NCBI-ProteinID:
AIR61200
UniProt:
A0AAN0S582
LinkDB
All DBs
Position
2357174..2357863
Genome browser
AA seq
229 aa
AA seq
DB search
MMDFIADDALTPAEESHYVNAYLPLVHRVVKQLSYQASSVMDRDDMEQIALMGLLTSLRR
YGHPDEQFGAYAVHRIRGAVLDELRQLDWRPRRLRQKTHKLNDAIREVARELGRPPNFSD
LAGRLDITAEEYQEYLLLDCAKSMDSLDELLSSETHSMPLNGRNLEEEVMVSRTLKTALA
SLDEREQMILTLYYQHEMSLKEIALVLGLTEARICQLNKKIAQKIEQFF
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttattgctgacgatgccctgacgcctgcggaagagtcacattatgtgaat
gcttacttaccgctggtccatcgggttgtgaagcagctttcttatcaggcgagcagcgtg
atggacagggacgatatggagcaaattgccctgatgggactactcacgtctttgcgtcgt
tacggccatcctgatgaacagtttggggcttatgccgtgcaccgtattcgcggagccgtg
ctggatgagctacgccagcttgactggcgtccacgtcgcctacgacaaaagactcataaa
ttgaacgatgccatccgcgaggttgcccgcgaacttggccgtccgcctaatttttctgac
cttgccgggcggctggatatcaccgccgaagagtatcaggaatatctgctgctggactgt
gcgaagtcgatggacagtctggatgaattgctcagcagtgaaacgcattcaatgcccttg
aatggcagaaatttagaagaagaagtgatggtgagccgcacgctgaaaaccgcgctggca
agccttgatgaacgtgaacaaatgattttgacgctttattaccagcatgaaatgagcctg
aaagaaatagccctggtgctggggctgacggaggcacgaatctgtcagttgaataaaaaa
atagcgcaaaaaattgagcagtttttttag
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