Cedecea neteri M006: LH23_12835
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Entry
LH23_12835 CDS
T03328
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cem01002
]
LH23_12835
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cem01011
]
LH23_12835
Peptidases and inhibitors [BR:
cem01002
]
Cysteine peptidases
Family C82
LH23_12835
Peptidoglycan biosynthesis and degradation proteins [BR:
cem01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LH23_12835
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AIR61513
UniProt:
A0AAN0S4S6
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All DBs
Position
2704578..2706416
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AA seq
612 aa
AA seq
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MLLRKVKDFRLSAVGYCLALSFAPLFVAQADEPAVVPSDSSAFQTDRPTELNQPLAQSTA
TATMAGTLPTNTSTMSAAQSRSQLIAGLPAGYTPVYLNALSAFYAARDMKPMWENRDAVK
AFQQQLAEVAIAGIQPQFNQWVELLTDPAVTGMARDVVLSDAMMGYLQFVSGIPIDGNRW
LYSSTPYKLKTPPLSVINQWQVAVDQGSLVNFIDSLAPQHPQYAQLHQSLIHLLADTRPW
PQMAGKETLRPGQWSNDVGALREILARTGMLQDKSSGVTSVADVTVSPSAINVEDASPQA
GKKKSQAAARGVYSRDLVDGVKRFQQWQGLGSDGAIGQLTRDWLNVTPQQRAALVALNIQ
RLRLLPDKLETGIMVNIPNYSLVYYLNGNEALASRVIVGRPDRKTPMMSSALNNVVVNPP
WNVPPTLARKDILPKVRQNPGYLEQHGYSVIRGWSNNAEMIDPWRVDWSTITENNLPFRF
QQKPGTQNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLQ
DAGWNDSRISSTLQEGNTKYVNIRHNIPVNLYYLTAFVGKDGRTEFRTDIYNYDLTARSG
AQNLAKAGLLIR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttagaaaagttaaagattttcgattgtcggcagtcggttactgcctggcgctc
agtttcgctccgctgtttgtggcccaggccgacgagcctgccgtcgttccctccgacagt
tctgctttccagaccgatcggcccacggaactcaatcagcctttggcacagtctacggcg
acggccacgatggccgggactttgccaacaaacacctccacgatgtcggcggcacaaagc
cggtcgcagcttattgcaggcctgcctgcaggatacacgccggtttatctcaacgccctg
tcggccttctatgccgcgcgtgatatgaagccgatgtgggaaaaccgcgatgcggttaaa
gcctttcagcaacagctggcggaagtggccattgccggaatacagccgcagtttaaccag
tgggttgagctgttgaccgacccagcagtgaccggtatggcgcgagatgtggtgctttct
gacgccatgatgggctacctgcagttcgtttcagggatcccgatcgacggcaatcgctgg
ctttatagcagtacgccttacaagttaaaaacgccgcctttgtcggtgattaaccagtgg
caggtggccgttgatcagggttctctggtgaactttatcgacagccttgcgcctcagcat
ccgcagtacgcccagctgcatcagtcgttgattcatctgctggctgacacccgtccgtgg
ccgcagatggctggcaaagagacgttgaggccggggcagtggagcaacgacgtgggggcg
ttgagagaaattcttgcccgaaccggcatgctccaggacaagtcatcgggggtgaccagc
gtagccgatgtcaccgtaagtccgtccgcgattaacgtcgaagacgcatctcctcaggca
ggcaagaagaaatctcaggctgcagcccgcggcgtttacagccgcgatctagtggatggc
gttaagcgcttccagcaatggcaagggctaggctcggatggcgcgattggccaactgacg
cgcgactggcttaacgtcacgcctcagcagcgtgcggcgcttgttgcattgaatattcag
cgtttacgactgctgccggacaaactcgaaaccggcattatggtgaacatccctaactat
tcgctggtgtattaccttaacggtaatgaagcgttggcttctcgcgttatcgttgggcgc
ccggatcgtaaaaccccgatgatgagtagcgcgctgaacaatgtcgtggttaacccgccg
tggaacgtgccgccgacgctggcgcgcaaagatattttgccaaaggttcggcagaatccg
ggttacctcgagcagcacggctatagcgtgatccgcggctggagcaacaatgccgagatg
atcgatccgtggcgcgtagactggtcgacgatcaccgagaataatctgccgttccgcttc
cagcagaagcccggcacgcagaactcgcttgggcgctataagttcaatatgccgagttct
gacgccatctacctgcacgacacgccaaatcataacctcttccagaaggatgcaagggcg
ctgagttcaggttgtgtgcgcgtcaataaggcgtccgaacttgcaaatatgctcctccag
gatgccgggtggaatgattcccggatatccagcacgttgcaggaaggtaataccaaatac
gtcaatatccgccataacattccggttaacctctactatttgaccgcttttgtcggaaaa
gatggccgtaccgagtttcgtacagatatttacaattatgatctcaccgcgcgatctggc
gcacaaaacctcgcaaaagccgggttattaatccgctaa
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