Cedecea neteri M006: LH23_16790
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Entry
LH23_16790 CDS
T03328
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
cem
Cedecea neteri M006
Pathway
cem00260
Glycine, serine and threonine metabolism
cem00270
Cysteine and methionine metabolism
cem00450
Selenocompound metabolism
cem00670
One carbon pool by folate
cem01100
Metabolic pathways
cem01110
Biosynthesis of secondary metabolites
cem01230
Biosynthesis of amino acids
Module
cem_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LH23_16790
00270 Cysteine and methionine metabolism
LH23_16790
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LH23_16790
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LH23_16790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cem04147
]
LH23_16790
Enzymes [BR:
cem01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
LH23_16790
Exosome [BR:
cem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LH23_16790
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
BRK
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AIR62248
UniProt:
A0AAN0S630
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All DBs
Position
complement(3525647..3526789)
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AA seq
380 aa
AA seq
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MNKFATQSVHSGTFDDAHGAVMPPIYATSTFAQPAPGQHTGFEYSRSGNPTRQALETAIA
ELEGGQRGYAFASGLAAISTVLELLDSGSHIIAVDDVYGGTWRLIENVRKRSAALQVSWV
KPEDLDGLQAAIRPETRMIWVETPTNPLLKLADLAAIADIAKRHRLISVADNTFASPALQ
RPLESGFDIVVHSATKYLNGHSDVVAGLAVVGGNDDLAQQLGYLQNAVGGVLDPFSSFLT
LRGIRTLALRMERHSSNALQLAEWLQTHPEVEKVYFPWLETHPQYHLARQQMSQPGGMIS
IVVRGNEKRAEEVIRKLKLFTLAESLGGVESLVSQPFSMTHASIPLEQRLSNGIVPQLIR
LSVGIEDAEDLRADLAQALS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgctacccagagtgtgcacagcggtacttttgatgatgcacacggcgcg
gtgatgccaccgatttatgccacatcgacctttgcccaaccggcaccgggccagcatacg
gggtttgaatactctcgcagcggcaacccgacccgccaggcgctggaaacggcgattgcc
gaactcgaaggcggccagcggggttacgcgtttgcctcagggctcgcggctatctcaacc
gtcctcgaacttttggacagcggcagccatatcattgccgttgacgacgtgtacggcggc
acctggcggttgattgaaaacgtgcgtaaacgcagcgccgcgctccaggtcagctgggtt
aagcctgaagacctcgacgggctgcaagcggctattcgccctgaaacacgtatgatttgg
gtggaaacgcctaccaacccactgcttaagctggcagacctggcggcaattgcggatatc
gcgaaacgccatcgcctgataagcgtggccgacaacacgttcgcttcgcctgcgcttcag
cgcccgctggagtccgggttcgatatcgtggtgcactcggccaccaagtacctgaacggc
cactctgatgttgtcgctgggctggcggtggttggcgggaatgacgacctggcacagcag
cttggctatttgcaaaatgcggttggcggcgtgcttgacccgttcagcagcttcctgacg
ctgcggggcattcgtacactggcgctgcgcatggaacgccacagcagcaacgcgctccag
ctggccgaatggctccagacgcatcctgaagtcgaaaaagtctatttcccgtggctggag
actcaccctcaatatcatctggcacgccagcaaatgtcgcagccaggcggcatgatttca
attgtggttcgcgggaatgaaaaacgcgctgaagaggtaattcgcaagctgaagctgttt
acgctcgccgaaagtctgggtggcgtggaaagcctggtcagccagccattcagcatgacc
catgcttctattccgctagaacagcggttgagtaacggcattgtgccgcagctgattcgt
ttgtcggtcgggattgaagacgcagaggatttgcgggcggatctggcacaggcgctgagt
taa
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