Cedecea neteri M006: LH23_19040
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Entry
LH23_19040 CDS
T03328
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cem03016
]
LH23_19040
Enzymes [BR:
cem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LH23_19040
Transfer RNA biogenesis [BR:
cem03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LH23_19040
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIR62678
UniProt:
A0AAN0S6V9
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All DBs
Position
complement(4022571..4023680)
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AA seq
369 aa
AA seq
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MITTDEGLAAVCLAARQFPALALDTEFVRTRTYYPQLGLIQLYDGQQVSLIDPLTISDWS
PFKALLQDPDTIKYLHAGSEDLEVFLNAFGMLPDPFIDTQILASFTGRPLSCGFATIVES
YTGIALDKSESRTDWLARPLTERQCEYAAADVLYLLPIAEKLMAETEAAGWIGAALDECH
LMCSRRRDQLDPEEAWRDIGNAWQLRTRQLACLKKLAAWRLRKARERDMAVNFVVREENL
WQVARYMPGSLGELDSLGLSGSEIRFHGKTLIALVAEAQALPESELPQPLQNLVDMPGYR
KVFKAIKALVQEVSEAKGLSAELLASRRQINQLLNWHWKLKPQNVMPELISGWRAELMAE
ALTKLLAEY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcactaccgatgaagggctggccgccgtttgcctggccgcccgtcaattccccgcg
ctggcactggacaccgagtttgttcgtacccgtacctactaccctcagctggggctgatc
cagctttatgacggtcagcaggtttcgctgatcgatcctttaaccatcagcgactggtcg
cctttcaaagccttgctgcaggatccggatacaatcaaatatctgcacgcgggcagtgaa
gatctcgaagtcttcctgaatgcttttggcatgctgccagatccgtttatcgatacgcag
attctggcttccttcactggccgcccgttgtcttgcggctttgccaccatcgtcgagtcc
tacaccggcattgcgctggataaaagtgaatcccggactgactggctggctcgtccgctc
acggagcggcagtgtgaatatgctgcggcagacgtactttatttgctgcctatcgctgag
aaactgatggccgaaacggaagcggcgggctggatcggtgcggctctcgatgagtgccat
ctgatgtgctctcgccgccgcgatcagcttgatccggaagaggcctggcgcgacataggt
aacgcctggcagctgcgaacccggcagttggcctgccttaagaagctggcagcctggcgc
cttcgcaaagcccgcgagcgcgatatggcggtaaactttgtcgtccgtgaagaaaacctg
tggcaggtggcgagatacatgcctggctcgctgggggagctggactcgcttggcctgagc
ggcagtgaaattcgcttccacggtaagacgcttatcgccctggtggccgaggcgcaggcg
ctgccggagagcgaactgccgcagccgctgcaaaaccttgtggatatgccgggctaccgc
aaagtgtttaaggcgattaaagctctggtgcaggaagtgagcgaggcaaaagggctgagt
gccgaattactggcctcccgccgccaaatcaatcagctgttaaactggcactggaaattg
aagccgcaaaacgtcatgccggaattaattagcggctggcgggcagaattaatggcagaa
gcgctaacgaaattgttggcggaatactga
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