Cedecea neteri M006: LH23_21435
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Entry
LH23_21435 CDS
T03328
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cem
Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:
cem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cem03032
]
LH23_21435
03400 DNA repair and recombination proteins [BR:
cem03400
]
LH23_21435
Enzymes [BR:
cem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LH23_21435
DNA replication proteins [BR:
cem03032
]
Prokaryotic type
DNA Topoisomerases
LH23_21435
DNA repair and recombination proteins [BR:
cem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH23_21435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
AIR63128
UniProt:
A0AAN0S7S2
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All DBs
Position
complement(4533167..4535803)
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AA seq
878 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGASGIAVGMAT
NIPPHNITEVINGCLAYIEDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILSAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRNSPNAAEAKASLVARSWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGKYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSAERLMEVIREELEAMRDQFGDNRRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILLFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPVREYAEGINVFMATASGTVKKTAL
TDFSRPRSAGIIAVNLNEGDELIGVDLTNGSDEAMLFSAAGKVVRFKEDAVRTMGRTATG
VRGIKLAGDDKVVSLIIPRGDGAILTVTQNGYGKRTAAAEYPTKSRATQGVISIKVTERN
GSVVGAVQVEDTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDESVVGLQRVA
EPVDDEELDSIDGSVAEGDDDIAPEADTDDDVADEADE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacgccggtcaacattgaggaagagctaaagagctcg
tatctggattatgcgatgtcggttattgtcggccgcgcactgccagatgtccgcgatgga
cttaagccggtacaccgtcgcgtgctttacgcgatgaacgtattgggcaatgactggaac
aaagcatacaaaaaatccgcccgtgttgttggtgacgttatcggtaaatatcaccctcat
ggtgataccgcggtttatgacaccatcgtccgtatggcacagccattttccctgcgttac
atgctggtcgacggccagggtaacttcggttccgtagacggcgactccgccgcggcgatg
cgttatacggaaatccgtatgtcgaaaatcgcccacgagctgatggcagacctggaaaaa
gagacggttgatttcgtcgataactacgacggcaccgaaaaaattccagacgtcatgcca
accaaaattcctaacctgctggtaaacggtgcatccggtatcgcagtcgggatggcgacg
aacattccgccgcacaacattaccgaagtgatcaacggctgcctcgcctatattgaagac
gagaacatcagcgttgaagggctgatggaacacatccctggcccggatttcccgactgcc
gctatcattaacggccgccgcggtattgaagaagcgtatcgtaccggccgcggtaaaatt
tatattcgcgcccgtgctgaagtcgaagcggacgcgaaaaccggccgcgagaccattatc
gttcacgaaattccgtatcaggtgaacaaagctcgcctgatcgagaaaatcgccgagctg
gtcaaagacaaacgcgtggaaggcatcagcgccctgcgcgatgagtctgataaagacggt
atgcgtattgttattgagattaaacgcgacgccgtgggcgaagtggtgctcaataacctg
tattcccagactcagctgcaggtttccttcggtattaacatggtggcattgcaccatggt
cagccgaagatcatgaccctgaaagagatcctgtctgcattcgtgcgccaccgccgcgaa
gtggtgactcgtcgtaccatctttgagctgcgcaaagcgcgcgaccgcgcacacatcctc
gaaggtctggcgatcgctctggcgaatatcgacccgatcatcgagcttattcgtaactcg
ccaaatgctgccgaagcaaaagcgagcctggtggcccgttcctgggacctgggcaacgtt
tctgcaatgcttgagcgcgcgggcgacgatgctgctcgtcctgagtggctggagccagag
tttggcatccgtgacggcaaatacttcctcaccgagcagcaggctcaggcgattttggat
ctgcgtctgcagaaactgaccggccttgagcacgaaaaactgctcgacgagtataaagag
ctgctggagcagatcgccgaactgctgcacatcctgggcagcgcagagcgcctgatggaa
gtgattcgcgaagagctggaagcgatgcgcgatcagttcggcgataaccgccgcaccgag
atcaccgctaacaccgcagatatcaacattgaagatctgatcaaccaggaagatgtggtg
gtcaccctgtctcaccagggctatgtgaagtatcagccgctgaccgattatgaagcgcag
cgtcgcggtggcaaaggcaagtcggccgcccgtattaaagaagaagactttattgaccgc
ctgctggtggccaacacccacgacacgatcctgctgttctccagccgtggtcgcctgtac
tggatgaaggtgtatcagctgccggaagcgagccgtggcgcgcgtggccgcccaattgtg
aacctgctgccgctggagcaggacgagcgcatcaccgcaattctgccggtgcgcgagtac
gcagaaggcatcaacgtgttcatggcgaccgcaagcggcaccgtgaagaaaacagcgctg
accgacttcagtcgtccgcgttctgcgggcatcatcgccgttaaccttaacgaaggtgac
gagctgattggcgttgatttaaccaacggcagcgacgaagcgatgctgttctcggctgca
ggtaaagtggtgcgcttcaaagaagacgccgttcgtaccatgggccgtaccgcaacgggc
gttcgcgggatcaaacttgccggtgacgacaaagtggtgtcgctgatcattcctcgcggt
gacggcgcgattctgaccgttacgcagaatggttatggtaaacgtaccgcggcggccgag
tatccaactaagtctcgtgcaacgcagggcgttatctccatcaaagtcaccgaacgtaac
ggcagcgtcgttggggcggtgcaggtggaagacaccgaccagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgtgtgtctgaagtcagcgtggttgggcgtaacacccag
ggcgttattctcatccgtactgcggaagacgaaagcgttgtgggcctgcagcgcgtcgcc
gagcctgtggatgacgaagagctggacagcatcgacggtagcgttgcagaaggggacgat
gatatcgcgccggaagcggataccgatgatgatgttgccgacgaagcggacgaataa
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