Cedecea neteri ND14a: LH86_00980
Help
Entry
LH86_00980 CDS
T03337
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cen03016
]
LH86_00980 (truD)
Enzymes [BR:
cen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LH86_00980 (truD)
Transfer RNA biogenesis [BR:
cen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH86_00980 (truD)
Prokaryotic type
LH86_00980 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIR63691
LinkDB
All DBs
Position
complement(199088..200134)
Genome browser
AA seq
348 aa
AA seq
DB search
MDMQNLTWLHGKPQGSGVIKASPEDFVVIEDLGFGPDGDGEHLLLRILKSGCNTRFVADA
LAKFLKVHAREVSFAGQKDKHAVTEQWFCVRLPGKEMPDMSAFTLEGCQVLEFARHRRKL
RLGALKGNRFTLVLREVSDLLEMEQRLQAVSEQGVPNYFGSQRFGIGGNNLHQAKRWAES
NAPLRDRNKRSFWLSAARSALFNQIVSQRLKKTDFNQVVDGDALQLAGRGSWFVATPEEL
PTLQQRVNDGELLITASLPGDGEWGTQNAALAFEQQSVADEEILLGLLKRERVEAARRAM
LVQPKELSWNWWDDVTVELNFWLPAGSFATSVVRELMNTAGDYANIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcaaaacctgacctggctgcacggcaagccgcagggcagcggcgtgatcaag
gccagcccggaagatttcgtggtcattgaggatctgggttttggcccggacggtgacggc
gaacatctgctgctgcgcattctgaaaagtggctgcaatacgcgtttcgtggccgatgcg
ctagcgaaattcctcaaagttcatgcgcgtgaagttagctttgccgggcaaaaagacaaa
catgcggtgaccgaacagtggttctgcgttcgcctgccgggcaaagagatgccggatatg
agcgcttttacgctcgaaggttgccaggtgctggagtttgctcgtcaccgacgcaagctg
cgcttaggggcgctgaagggaaaccgctttaccctcgtgctgcgcgaggtgagcgatctc
ctcgagatggagcagcgcctgcaggccgtatcggagcagggcgtgcctaactatttcggc
agccagcgttttggcatcggcggcaataacctgcatcaggcgaagcgctgggcagaaagc
aatgcgccgctgcgcgacagaaataaacgcagtttttggttgtcggcggcccgcagcgcg
ttgtttaatcagattgttagccagcgcctgaaaaaaacagactttaatcaagttgttgat
ggcgatgcgctacaattggcaggacgcggcagctggtttgtggcgaccccggaagaactt
cccaccctgcaacagcgagtgaatgacggcgaactgctgatcaccgcttcgctgccgggc
gatggcgagtggggaacgcaaaatgcagcgctggcttttgagcagcaatccgtggcggac
gaagagattctgctggggctgctgaagcgtgagcgggtggaagcggcgcgccgtgcgatg
ctggttcagccgaaagagctgagctggaactggtgggatgatgtcaccgtcgagctgaat
ttctggttaccggcgggaagttttgccaccagcgttgtcagggaactcatgaacacagcg
ggtgattatgcgaatattgctgagtaa
DBGET
integrated database retrieval system
