Cedecea neteri ND14a: LH86_01150
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Entry
LH86_01150 CDS
T03337
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cen03009
]
LH86_01150 (rumA)
Enzymes [BR:
cen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LH86_01150 (rumA)
Ribosome biogenesis [BR:
cen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH86_01150 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
Methyltransf_25
RrnaAD
MTS
TRM5-TYW2_MTfase
Methyltransf_ANTKMT
Methyltransf_11
Methyltransf_4
Methyltransf_23
Cons_hypoth95
FtsJ
CMAS
YehQ_C
Methyltr_RsmB-F
Ubie_methyltran
Ribosomal_L22
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AIR63723
LinkDB
All DBs
Position
complement(233360..234673)
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AA seq
437 aa
AA seq
DB search
MAQFYSAKRRDTNRELLTVTVTDLDPFGQGVARHKGKALFIRGALPGEQVEVRITEDKRS
YAQAEVKRRLNDSPERVKPRCPHFGVCGGCQQQHASVALQQEAKAKALGRMMGEREQPRE
VDEIISAGAWGYRRRARLGLNYQPRTQTLQMGFRKASDKALVDIHHCPVLAPRLEALLEP
LRQCLSELSIVNRLGHLELVLADGGPLMVLRHLAPLSKDDREKLEQFSHSHEVALFLAPD
SESLESLAEEEPWYHSDGLRLTFSPRDFIQVNDAVNQQMVARAIEWLEVQPEDRVLDLFC
GMGNFTLPLAKRAAAVVGVEGVAALVAKGEYNAQRNALKNVTFFHENLEDDVTRQPWAQQ
GFTKILLDPARAGAAGVMQHVINLAPSRVVYVSCNPTTLARDSETLLAAGYHIKRLAMLD
MFPHTGHLESMALFERN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaagcgacgcgatacgaatcgtgaattacttaccgtgacc
gtcaccgacctcgatccattcggtcagggcgtcgcgcgccacaaaggcaaagcgctcttt
attcgtggagcactgcccggcgaacaggttgaggttcgcattaccgaagataagcgtagc
tacgctcaggctgaggtaaagcgccgtttaaatgacagccctgagcgtgttaagccgcgt
tgcccgcattttggcgtttgcggcggctgccagcagcagcacgcgagcgtggcgctacag
caggaggcaaaagctaaggctcttgggcgcatgatgggcgagcgcgaacagcctcgcgag
gtggatgaaatcatttctgccggggcatggggataccgtcgtcgcgcgcggttggggttg
aattatcagccccgtacacagaccttacagatgggttttcgcaaggctagcgacaaggcg
ctggtagatattcatcattgccccgtgctggcgccccggcttgaagcattactggaacct
ttacgccagtgcttgtctgaattaagtatcgtgaaccggttagggcacctggagctggtt
ctggctgacggtggaccgctgatggtgctgcgccatttggcaccgctcagcaaagacgac
cgggaaaaactggaacagttttcgcattcccatgaggtggcattgttcctcgccccggat
agcgagagcctggaatccctggccgaagaagagccctggtatcattcagacggactacgc
ttaacctttagcccaagggatttcatccaggttaacgacgcggtgaatcagcaaatggtg
gcgcgggcgatcgagtggttggaggtgcagcctgaggatcgggtgctagatttgttctgc
ggaatggggaattttaccctgccgttggcaaaacgagccgccgcggtcgtgggggtcgaa
ggcgttgctgcgctggtggcgaaaggtgaatataatgctcagcgtaatgcgctgaaaaac
gtgacattcttccatgaaaacctggaagatgacgtgacgcggcagccctgggcgcaacaa
ggatttacgaaaatattgctcgacccggcgcgtgccggtgcggcgggcgttatgcagcac
gtcatcaatcttgcgccgagccgcgtggtgtacgtttcctgcaaccccaccacgcttgcg
cgcgacagtgaaacgttactggccgccgggtaccacattaaacgactggccatgctcgat
atgttcccccacaccgggcatctggagtctatggcgctctttgagcgtaattga
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