Cedecea neteri ND14a: LH86_02620
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Entry
LH86_02620 CDS
T03337
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cen03000
]
LH86_02620 (treR)
Transcription factors [BR:
cen03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LH86_02620 (treR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_7
HTH_23
HTH_3
HTH_IclR
HTH_31
CENP-B_N
MarR_2
Peripla_BP_4
HTH_Tnp_ISL3
AAA_18
HTH_AraC
HTH_Crp_2
HTH_26
MarR
HTH_38
TrmB
HHH
Motif
Other DBs
NCBI-ProteinID:
AIR64008
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Position
553954..554901
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AA seq
315 aa
AA seq
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MQSRLTIKDIARLSGVGKSTVSRVLNNESGVSARTRERVEAVMQQHEFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPCLYEQGYDPIMMESQFSPEMVEEHLGMLRRRNID
GVILFGFTGINEKVLQPWRSTLVLMARDASGFASVCYDDEGSIHILMSTLYQQGHRDISF
LGVPHGDVTTGYRRHHAYLAFCRDHDIVPNAALPGLAMKQGYEHVVEVLTPKTTALLCAT
DTLALGASKYLQQQNRSDIQLASVGNTPLMKFLHPEIITVDPGYAEAGRAAALQLIGQIS
QSQQLRQIVIPSHLQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtcgccttaccatcaaagatattgcccgcctgagcggcgtggggaaatctacc
gtctctcgcgtattgaacaatgaaagcggcgtcagcgcccgcacgcgggaacgggttgaa
gcggtaatgcagcagcatgagttttctccctcccgctcggcgcgtgcgatgcgcgggcaa
agcgacaaagtcgtcgccattatcgtgacccgcctggactccctgtcggaaaatctggcg
gtgcaaaccatgctgccttgtctttacgagcagggctatgacccgatcatgatggaaagc
cagttctcaccagagatggttgaggagcatctcggcatgctgcgccgccgtaatatcgac
ggcgtgattctgttcggcttcacgggtatcaacgagaaagtgctgcagccgtggcgttcc
acgctggtactgatggcgcgcgatgccagcggcttcgcttcggtgtgttatgacgatgaa
ggctcaattcacatcctgatgtctacgctttatcagcagggccaccgcgatatcagcttc
ctgggcgtgccgcacggcgacgttaccaccggttaccgccgtcaccatgcctatctcgct
ttttgccgtgaccacgatattgttccgaatgccgccttgcccggcctggcgatgaagcaa
ggctacgagcatgtagttgaagtcctgaccccaaaaaccaccgctctgctgtgcgccacc
gataccctggcgctgggcgcaagcaaatacctccagcagcaaaaccgcagcgatattcaa
ctggcgagcgtggggaacacgccgctgatgaaattcttgcaccctgaaatcatcaccgtt
gacccaggctacgccgaagccggtcgcgccgcggccttgcagctgatcgggcagatttct
caaagccaacagctgcggcagatcgtcatccctagtcacctgcaataa
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