Cedecea neteri ND14a: LH86_03115
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Entry
LH86_03115 CDS
T03337
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cen03019
]
LH86_03115
Messenger RNA biogenesis [BR:
cen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LH86_03115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AIR64104
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All DBs
Position
complement(654705..656645)
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AA seq
646 aa
AA seq
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MRLTTKLSAFITLLTGLAIFVTLVGCLLSFYNSVHDKTQQRIMAVVTIIDNQLVSRSPQD
LVDHFSELMIPVDITEIRLMADKTYLFQHVLPEGYRPVGTQYTYRTINVALMKHPGMTLR
LTYLDPIAVYYHAMFTTTPLTAAVAFMLVILFLAGRWLRRQLSGQELLEIRAGKIISGER
GAEVRGSVHEWPPLVSSAMDTLLSDLQSASEQRSRVDTLIRAFAAQDIKTGLNNRLFFDN
QLATLLEGQEQVGAHGVVMMIRLPDFELLKETWGNGPVEEYLFTLVNLLSTFVMRYPGAL
LARYFRSDFAVLLPHRTLKEADGIASQLLNSVDALPSTRMVDRSDMLHIGICAWRSGQTK
EQVMEHAEIATRNAAFQGANSWSVYDDKLPEQGRGNVKWRTLLEQVLKQGGPRFYQKPAV
DKHGVVHHREIMCRIFDGEQEVLSAEYMPMVRQFGLSEQYDRQIVSRLLPLLNFWPEETL
AIQITVDSLIRAPFQRWLRDSLMQCEKSKRARIIFELAEADVCQHISRLQHVVRLITALG
ARVVIIQAGLTVVSTTYIKELDVELIKLHPGLVRNIGKRTENQLFVKSLVEACNGTRIHV
FATGVRTRGEWQTLIDNGVAGAQGDFIAASQPLDSNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaactttcagcctttattaccctcttaaccgggcttgcgattttc
gttacgctcgttgggtgcctgctaagtttctataactctgttcacgataaaactcagcag
cgcattatggctgttgtcaccatcattgataaccagcttgtctcacgctcgcctcaggat
cttgtggatcactttagcgagctgatgataccggtggacatcaccgaaattcgcctgatg
gcggataaaacctacctcttccagcatgttttacccgaaggctatcgtcctgtagggacg
caatatacataccgcactattaacgtcgcgttgatgaagcaccctggtatgacgctgcgg
ctgacttatctcgatccgatcgctgtctactatcacgccatgtttaccacgacgccgttg
actgcagcggtcgcttttatgctggtgatactcttcctggccgggcgctggctaagacgc
cagctttccgggcaagagctgctggaaatcagagccggaaaaatcattagtggggaacga
ggggcagaagtccgtggttcggtgcatgaatggccgccgctggtgagtagcgcgatggat
accctactttccgatctgcaaagcgccagcgagcagcgaagccgcgtggataccttgatc
cgggcatttgccgcccaggacattaaaaccggcctcaataaccgtttgttctttgataac
caactggccacgctgctggaaggtcaggagcaggtcggcgctcacggcgtggtgatgatg
attcgcctgcctgattttgagctattaaaagagacctggggcaatggcccggttgaagaa
tacttattcactttggttaacctgctttctacctttgtaatgcgctatcctggcgcttta
ttagctcgctatttccgcagtgatttcgcagtattgctgccgcaccgcacgctgaaagaa
gcggatggtattgccagccaactgctgaattccgtagatgcgctcccgtcaactcgcatg
gttgatcgcagcgatatgctgcacatcggcatttgcgcgtggcgcagcgggcaaacaaaa
gagcaggtcatggagcacgcggaaatcgcgacccgcaatgccgctttccagggggccaac
agctggtccgtctacgacgacaagctcccggaacagggcaggggcaacgtgaaatggcgc
actttgcttgagcaggtactcaaacagggcggcccgcgcttttatcagaaaccagcggtt
gataagcatggggtggttcaccaccgtgaaatcatgtgccgaatcttcgacggcgagcaa
gaggttttgtcggcagaatatatgccgatggtcaggcagtttggtttatctgaacaatat
gaccggcagatagtgtcccggctgttgccgctgctaaacttctggccggaagaaaccctt
gccattcaaatcaccgtcgactcgctgatccgcgcccctttccagcgttggctgcgtgat
tcactgatgcagtgcgaaaaatcgaagcgagcacggattatttttgaacttgctgaggca
gatgtctgtcaacacatcagccgattacaacatgttgtaaggttaatcactgcgttaggg
gcaagggttgtgattatccaggcgggattaacggtcgtcagcacaacttatataaaagag
ctggatgtggagttaattaagctgcatccgggtctggtcagaaacatcggcaagcgtacc
gaaaaccagctttttgtgaagagcctggttgaagcctgtaacgggacgcgaatccatgtt
tttgccacaggagtgaggacccgcggcgagtggcagacgctgattgataacggggttgcg
ggggcgcagggcgattttatcgccgcatctcagccgcttgacagtaatgtgaaaaaatat
tcacaaagatattcggtttaa
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