Cedecea neteri ND14a: LH86_04625
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Entry
LH86_04625 CDS
T03337
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cen03032
]
LH86_04625 (gyrB)
03400 DNA repair and recombination proteins [BR:
cen03400
]
LH86_04625 (gyrB)
Enzymes [BR:
cen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LH86_04625 (gyrB)
DNA replication proteins [BR:
cen03032
]
Prokaryotic type
DNA Topoisomerases
LH86_04625 (gyrB)
DNA repair and recombination proteins [BR:
cen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH86_04625 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AIR64390
LinkDB
All DBs
Position
complement(952928..955342)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAQVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIRREGKVHQQTYIHGEPQAPLAVTGDADVTGTQVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLVDKRDGKQDHFHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIAIALDGATLHTNASAPALAGEPLEKLVAEYNTAQKMIGRMERR
YPRNLLNNLVYHPTLQVADLADEAKVTQWISALTATLNEKEQHGSTWKYDIHHNSELNVF
EPIVRVRTHGVDTDYVLEKEFVEGGEYGRLCALGEKLRGLIEEDAFIERGERRQPVASFE
QALEWLQKESRRGLAIQRYKGLGEMNPDQLWETTMDPDSRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtccttaaggggctggatgcggtacgt
aagcgcccgggcatgtatatcggcgatacggatgacggcaccggtctgcaccacatggta
tttgaggtcgtggataacgctatcgacgaagcgctcgcgggccactgtaaagacatcgtg
gtcactatccacgcggataactccgtctcggtaaccgatgatggccgtggtattcctacc
ggtattcacccggaagagggcgtctctgcggcgcaggttatcatgaccgtactgcacgcc
ggcgggaagttcgatgacaactcctataaggtgtccggcggcctgcacggcgtaggcgtc
tcggtggttaacgccctgtcccagaagcttgagctggtcattcgccgcgaaggtaaagtg
catcagcaaacctacatccacggtgagcctcaggctccgctggcagtgaccggtgacgcc
gatgtgaccgggactcaggtgcgtttctggccgagccatgaaaccttcaccaacgtaacc
gaattcgaatacgaaatcctggctaagcgtctgcgtgagctgtcgttcctgaactctggc
gtgtctatccgcctggtcgacaagcgcgacggcaaacaggatcacttccactacgaaggc
ggtatcaaggctttcgttgagtacctcaacaagaacaaaaccccgattcacccgaacgtg
ttctatttcagcactgaaaaagacgggatcggcgtggaagtggcgctgcagtggaacgac
ggtttccaggaaaacatctactgcttcaccaacaacatccctcagcgcgacggcggtact
caccttgcgggcttccgcgcggcgatgactcgtaccctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggtgacgatgcgcgtgaaggcctgatt
gcagtagtttccgtgaaagtgccggatcctaaattctcttcccagaccaaagacaagctg
gtttcttcggaagtgaaatccgcggttgagcagcagatgaacgaactgctggccgaatac
ctgctggaaaacccgtctgacgcgaaaatcgttgtcggcaaaattattgatgctgcacgt
gcccgtgaagctgcacgtcgcgcacgtgaaatgacccgccgtaaaggtgcgctggatctg
gctggcctgccgggcaagctggcggactgccaggaacgcgatccggcgctgtctgaactg
taccttgtggaaggggactctgcgggcggctctgcaaaacaggggcgtaaccgtaagaac
caggcgatcctgccgctaaaaggtaaaatccttaacgttgagaaggcgcgcttcgacaag
atgctctcttctcaggaagtggcgacgcttatcaccgcattgggctgcggcattggccgt
gacgagtacaacccggacaagctgcgctaccacagcatcatcatcatgaccgatgccgac
gtcgacggctctcacattcgtacgctgctgctgaccttcttctaccgtcagatgccggaa
atcgttgagcgtggccacgtctacatcgctcagccgccgctgtacaaagtgaagaaaggc
aagcaggaacagtacatcaaagatgatgaggcgatggaccagtaccagatcgctatcgcc
cttgacggtgcaaccctgcacaccaacgccagtgcacctgcgctggctggcgaaccactc
gagaagctggtggcggaatacaacaccgcgcagaaaatgattggccgcatggagcgtcgt
tatccacgcaacctgctgaataacctggtttatcacccgacgctgcaggtggccgacctg
gccgatgaagcgaaagtgacgcagtggatttctgcgctgaccgcgacgctgaacgaaaaa
gagcaacacggcagcacctggaaatacgatattcaccataacagcgagctgaacgtgttt
gagccgattgtacgcgtgcgtactcacggcgtggacaccgactacgtgctggaaaaagag
tttgtggaagggggcgaatatggccgtctttgcgcactcggtgagaagctgcgtggtctg
attgaagaagatgcctttatcgaacgtggcgaacgtcgtcagccggtagccagcttcgag
caggcgctggagtggctgcagaaagagtcacgtcgtggcctcgctatccagcgctataaa
ggcctgggtgaaatgaacccggatcagctgtgggaaaccactatggatcctgacagccgc
cgcatgctgcgcgtgaccgttaaagacgcgattgccgcggaccagctgttcactaccctg
atgggcgatgcggttgaaccacgccgtgcatttatcgaagagaacgccctgaaagcggcg
aacatcgatatctaa
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