Cedecea neteri ND14a: LH86_05330
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Entry
LH86_05330 CDS
T03337
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cen
Cedecea neteri ND14a
Pathway
cen03030
DNA replication
cen03410
Base excision repair
cen03420
Nucleotide excision repair
cen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH86_05330
03410 Base excision repair
LH86_05330
03420 Nucleotide excision repair
LH86_05330
03440 Homologous recombination
LH86_05330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cen03032
]
LH86_05330
03400 DNA repair and recombination proteins [BR:
cen03400
]
LH86_05330
Enzymes [BR:
cen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH86_05330
DNA replication proteins [BR:
cen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LH86_05330
DNA repair and recombination proteins [BR:
cen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LH86_05330
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH86_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIR64527
LinkDB
All DBs
Position
1116432..1119218
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIADNPLILVDGSSYLYRAYHAFPPLTNSRGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LALEAEKAGRPVLISTGDKDMAQLVTPGVTLINTMTNTILGPEEVQTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYANPEKIAELTFRGAKTMAAKLEQSK
ELAYLSYKLATIKTDVELELGCEQLEVQPPAADELLTLFKQYEFKRWITDVEAGKWMQAK
GAKPAVQPQKAAEIEAEPEAPASQLSYDNYVTILDESVLIEWIERLKKAPLFAFDTETDS
LDNVSANLVGLSFATEPGVACYIPVAHDYLDAPEQISRERALELLKPLLEDEKALKVGQN
LKYDRGIMQNYGIELRGIAFDTMLESYTLDSVAGRHDMDSLADRWLKHQTISFEEIAGKG
KKQLTFNQIDLETAGRYAAEDADVTLQLHLKMWPKLEKVEGPLNIFKNVEMPLVPVISRI
ERNGVKIDPAILHAHSGELTKRLAELELKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMISPITGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVILSADYSQIELRIMAHLSRD
KGLLSAFAEGKDIHRATAAEVFGLPLESVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLEYMERTRAQAKDQGYVETLDGRRLYLPDINSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDSWLETDKPRVKMIMQVHDELVFEVHKDDVEAVSKKV
HELMESSMKLDVPLLVEVGSGKNWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggtccagatcgcagacaacccgcttatcctcgttgatggctcttcctatctttatcgg
gcatatcatgccttcccaccgttgacgaacagccgtggcgagccaacaggggcgatgtac
ggtgtgctgaacatgctgcgtagcctgattttgcaataccagccgacgcacgctgccgta
gtgtttgatgccaaaggcaaaacgttccgtgatgagctgtttgaggactataaatcgcac
cgacccccaatgccggacgatctcagagcgcagattgagccgctgcatgcgatggttaaa
gcgatgggcctgcctttactggctgtctctggcgttgaagctgatgacgttattggtacg
ctggcgctggaggctgaaaaagccggtcgtccggtattaatcagtaccggtgataaagac
atggcgcagctggtgacgccgggcgtgacgctgattaacaccatgactaataccattctt
gggccggaagaggtgcagacaaaatacggcgtgcctccggagctgattatcgacttcctg
gcgctgatgggtgactcttcggacaacatccctggcgtgccgggcgtgggtgaaaaaacg
gcacaggcgctgcttcaggggctgggtggtctggatacgctttacgccaaccctgaaaaa
atagccgaacttaccttccgcggtgcgaaaaccatggctgctaagctggagcaaagcaaa
gagctggcctacctctcctataagctcgcgaccattaagaccgacgttgagctggaactg
ggctgcgagcagcttgaagtccagccgccggcggcagacgaactgctgacactcttcaag
cagtatgaattcaagcgctggataactgacgtagaggccgggaaatggatgcaggccaaa
ggggctaaaccggccgtgcagccgcagaaagccgctgagattgaagccgaaccggaagcg
ccagccagccagctctcttatgacaattacgtcactatcctggatgagagcgtactgatt
gaatggattgagcggctgaaaaaagcgccgctctttgcctttgataccgagaccgacagc
ctggacaacgtcagtgccaatctggtggggctttcctttgccactgaacccggagtggcc
tgttatattcccgttgcgcatgactatctcgacgcgccggagcagatttctcgcgagcgc
gcgctggagctacttaagccgctactggaagacgagaaagcgctgaaagtcgggcagaac
ctgaaatacgaccgtggcatcatgcagaattatggcattgagctgcggggtatcgctttt
gacaccatgctggaatcctacacgctggacagcgttgcaggtcgtcatgatatggacagc
ctggccgatcgctggctgaagcaccaaaccatctcgttcgaagagattgccggcaagggc
aaaaagcagctgacctttaaccagatcgatctggaaactgccgggcgctatgcggcagaa
gacgccgacgttaccctgcagctgcatctaaagatgtggcctaagctcgagaaggttgag
ggcccgcttaacatctttaaaaacgtcgaaatgccgctggtgccggtgatttcgcgcatt
gaacgcaacggcgtgaaaatcgacccggctattttgcacgcgcattctggtgagctgact
aaacgcctggccgagcttgaactcaaagctcatgaaatcgctggagaagaattcaatctc
tcttctacaaagcagctgcaaaccattctctttgaaaagcaaggtattaagccgctgaag
aaaacgccgggcggtgcgccttcgacgtctgaagaggtgcttgaagagctggcgctggac
tatccgctgccgaaagtgatcctggaataccgtggcctggctaagctgaaatccacctac
accgacaagttaccgctgatgattagcccgataaccggacgtgtacatacgtcttatcac
caggctgttacggccaccgggcgtttatcttctaccgatcctaacctgcagaacattcct
gttcgcaacgaagaagggcgtcgtattcgccaggcctttattgcgcctgaagattacgtg
attctttctgcggactactcgcaaattgaactgcgcattatggctcacctctcccgtgat
aaaggcctgttaagcgcctttgccgaagggaaagatatccaccgcgccaccgctgcggaa
gtgtttggtctgccgcttgaaagcgtcaccggcgagcagcgccgaagcgcgaaagcgatt
aactttggtctgatctacggcatgagcgcctttggcctttcccgccagctcaatattccg
cgtaaagagtcccaaaagtatatggatctctacttcgagcgctatccgggcgtgctggag
tatatggagcgtacgcgtgctcaggcgaaagatcagggttatgttgaaacgctggatggc
cgccgtctttacttgccggacatcaattccagcaacggtgctcgccgcgccggcgcggaa
cgtgcggcaattaacgccccgatgcagggtaccgctgccgatattatcaagcgcgcgatg
atcgccgtcgacagctggctggagacagacaagccacgtgtgaagatgataatgcaggtg
cacgatgaactggtgttcgaagtacacaaagacgacgtggaagcggtgtctaaaaaggtg
catgagctgatggaaagcagcatgaagctcgacgtgccgctgctggtggaagtgggcagc
ggtaaaaactgggatgaggcgcattaa
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