Cedecea neteri ND14a: LH86_05555
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Entry
LH86_05555 CDS
T03337
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cen
Cedecea neteri ND14a
Pathway
cen00541
Biosynthesis of various nucleotide sugars
cen01100
Metabolic pathways
cen01250
Biosynthesis of nucleotide sugars
Module
cen_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LH86_05555 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cen01005
]
LH86_05555 (rfaD)
Enzymes [BR:
cen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LH86_05555 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cen01005
]
Core region
LH86_05555 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
TrkA_N
Ldh_1_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AIR64570
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Position
complement(1164086..1165018)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKSLNEQGYRDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI
MAGEDFGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKEILHYCLEREIPFLYASSAATY
GGRNKDFIESREYEQPLNVYGYSKFLFDEYVRQILPEANSQVTGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGENPKLFEGSDGFKRDFIYVGDVAAVNLWFWENGVSGIFNCGTGRA
ESFQAVADAALAYHNKGSIEYIPFPEKLKGRYQAYTEADLTNLRAAGYDKPFKTVAQGVA
EYMKWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggcgccggcatgatcggcagcaacattgttaagtcactgaat
gagcaaggctaccgcgatatcctggtagtggataacctcaaagacgggactaaatttgtt
aacctggttgatctggacatcgccgactacatggataaggaagacttcctgatccaaatt
atggccggggaagacttcggtgatatcgacgccatcttccatgaaggtgcctgctcctcc
accaccgagtgggacggcaagtacatgatggacaacaactatcagtactctaaagaaatt
ctgcactactgcctggagcgtgaaattccgttcctctacgcctcttccgccgcgacctac
ggtggacgcaataaagacttcatcgaatcacgcgaatatgaacagccgctgaacgtatat
ggttactcaaaattcctgtttgatgaatatgtgcgccaaatcctgccagaagcgaactct
caggtgaccggcttccgctactttaacgtctacgggccgcgtgaaggccacaaaggcagc
atggcgagcgtcgccttccacctcaacacccaattgaataacggtgaaaatcctaaactc
tttgaaggcagtgacggcttcaagcgtgacttcatctatgtgggtgatgtggccgccgtt
aacctctggttctgggaaaatggtgtttccggtattttcaactgcggtaccggccgtgcg
gaatccttccaggccgtggcagatgcagcgctggcgtatcacaacaaaggcagcatcgag
tacattcctttcccggaaaagctaaaaggtcgctatcaggcttatactgaagccgactta
accaatctgcgcgctgcgggttacgacaagccgttcaaaaccgttgcccaaggggttgcg
gaatacatgaaatggttaaatcgcgacgcataa
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