Cedecea neteri ND14a: LH86_07165
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Entry
LH86_07165 CDS
T03337
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cen
Cedecea neteri ND14a
Pathway
cen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH86_07165 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cen03019
]
LH86_07165 (groEL)
03110 Chaperones and folding catalysts [BR:
cen03110
]
LH86_07165 (groEL)
03029 Mitochondrial biogenesis [BR:
cen03029
]
LH86_07165 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cen04147
]
LH86_07165 (groEL)
Enzymes [BR:
cen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LH86_07165 (groEL)
Messenger RNA biogenesis [BR:
cen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LH86_07165 (groEL)
Chaperones and folding catalysts [BR:
cen03110
]
Heat shock proteins
HSP60 / Chaperonin
LH86_07165 (groEL)
Mitochondrial biogenesis [BR:
cen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LH86_07165 (groEL)
Exosome [BR:
cen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LH86_07165 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
LH86_07165 (groEL)
Exosomal proteins of breast cancer cells
LH86_07165 (groEL)
Exosomal proteins of colorectal cancer cells
LH86_07165 (groEL)
Exosomal proteins of bladder cancer cells
LH86_07165 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AIR64866
LinkDB
All DBs
Position
1509218..1510864
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLEDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVGQIRKQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALV
RVAAKLAGLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVTNAVKAGEGNYGYNA
ATEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtaaaaatgctgcgcggcgtt
aacgtactggcagatgcagtgaaagttaccctcggtcctaaaggccgtaacgtggttctg
gataaatctttcggtgcaccgaccatcaccaaagatggcgtttccgtagcacgtgaaatc
gagctggaagacaagttcgaaaacatgggtgcacagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggtgacggcaccaccaccgcaaccgtactggctcaggctatcatc
accgaaggtctgaaagccgttgctgcgggcatgaacccaatggacctgaaacgcggtatc
gataaagccgttgttgccgctgttgaagagctgaaagcgctgtccgtgccgtgctctgac
tctaaagcaattgctcaggttggtactatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggataaagtcggtaaagaaggcgtgatcaccgttgaagacggt
accggtctggaagacgaactggacgtggttgaaggtatgcagttcgaccgcggttacctg
tccccatacttcatcaacaagcctgaaactggcgctgttgagctggaaagcccgttcatc
ctgctggctgacaaaaaaatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gcgaaagcaggcaaaccgctggttatcatcgctgaagacgttgaaggcgaagcgctggct
accctggtggttaacaccatgcgtggcatcgtgaaagtggctgcggttaaagcaccaggc
ttcggcgaccgtcgtaaagctatgctgcaggacatcgctactctgaccggtggtaccgtt
atctctgaagagatcggtatggagctggaaaaagcgactctggaagacctcggccaggct
aaacgcgttgtgatcaacaaagacaccaccaccatcatcgacggcgtgggtgaagaagct
gctattcagggccgtgttggtcagatccgtaagcagatcgaagaagcaacttctgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgtagcggtaatcaaa
gtcggtgctgctaccgaagttgaaatgaaagagaaaaaagctcgcgtcgacgatgccctg
cacgctacccgtgctgcggttgaagaaggcgtggttgccggtggtggtgtagcgctggtt
cgcgttgccgctaaactggctggcctgaccgctcagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcgatggaagcgcctctgcgtcagatcgtttctaacgccggtgaa
gagccatccgttgtcaccaacgcggtgaaagcgggcgaaggtaactacggttacaacgct
gcgaccgaagaatacggcaacatgatcgatttcggtatcctggacccaaccaaagtgact
cgttctgctctgcagtacgcggcgtccgttgcgggcctgatgatcactaccgagtgcatg
gtcaccgacctgcctaaaggcgatgctcctgacttaggcgctgctggtggcatgggcggt
atgggtggcatgggcggcatgatgtaa
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