Cedecea neteri ND14a: LH86_08870
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Entry
LH86_08870 CDS
T03337
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cen03021
]
LH86_08870
Transcription machinery [BR:
cen03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LH86_08870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AIR65192
LinkDB
All DBs
Position
complement(1848363..1851269)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYARNDSPITRVMFNPGDV
ITSHEGWQLKVDEVKEEKGLLAYLGTRLDTEESDVLLREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQSRQIWSGLRGMRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGSAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DSSNPFDTEQLVICSLDFVRRNKQRLENLCEAEWDLLVVDEAHHLVWNEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAMFVDEQQNYRPVADAVALLL
AGDRLTDEQLNTMGELIGEQDIEPLLQTANSDREGSEAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMAARKSVEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVDWYHAGLDAFEHTCPTGRTIYDSVYPQLIEYLAAPENT
EGFDALIKQCREQHDALKQQLEQGRDRLLEIHSNGGEKAQALAEAISAQDNDTNLVSFAM
NLFDIVGINQDDRGDNMVVITPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFVTWE
HPIIRNGLDLILSGDTGSCALSLLKNKALPVGTLLLELVYVVEAKAPKQLQLNRFLPPTP
VRMLVDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQSDVHAILQVAEEKVADAAQ
ALIDAAREEADEKLSAELSRLEALKAVNPNIRDDELVAIETNRQQVMEALSQANWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgttggatcagcgataccgaaagcgaactgggactggga
accgttgtggcgctggatgcgcgtatggtcaccctgctcttcccggcaacgggtgaaaat
cgtctgtacgccagaaatgactccccaatcacccgcgtgatgtttaacccaggcgacgtg
attaccagccatgaaggctggcagctgaaagttgatgaagttaaggaagaaaagggttta
ctcgcctacctcggcacccgtctcgataccgaagagtctgacgtcctgctgcgcgaagtg
tttctcgacagcaaactggtcttcagcaaaccacaggatcgcctgtttgccgggcaaatc
gaccgtatggaccgttttgcgctgcgtttccgcgcccgcaaatatcagagcgaacagtcg
cgccagatttggagtggcctgcgcgggatgcgcaccagcctgatccctcaccagctaaac
atcgcccatgatgttggccgtcgccatgcgccacgcgtattgctcgcggatgaggttggt
ctgggtaaaaccattgaagccgggatgatcatccaccagcagctgctggccggtagcgcc
gagcgcgtgctgattgtggtcccggaaaccctgcagcatcagtggctggtcgaaatgctg
cgccgctttaacctgcgcttcgcgctgtttgacgatgaacgttacgcggaagctcagcac
gacagcagcaatccgtttgacaccgaacaattggtcatttgctcgctggacttcgtgcgt
cgcaacaaacagcgcctggaaaacctctgcgaagcggagtgggatctgctggttgtcgat
gaggcccatcatctggtgtggaacgaagacgcgcctagccgtgaataccaggcgattgaa
cagctggccgagcatgttcctggcgtcctgttgctgaccgccacgcctgaacagctgggc
atggaaagccacttcgcgcgcttacgcctgctggacccaaatcgcttccatgatttcgcc
atgttcgtcgacgagcagcagaattatcgcccggtcgcagacgcagttgctttgctgctg
gcgggtgaccgtctgaccgatgagcaactgaataccatgggtgagctgatcggcgagcag
gatatcgaaccgctgctgcaaaccgccaacagcgatcgcgaaggcagtgaagccgcgcgc
caggagctcgtctccatgctgatggacagacacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtgaaaggtttcccgaaacgcgaactgcacaccattcgcctgccgctg
ccaacccagtaccaaacggcgattaaagtctcaggcattatggccgcgcgtaagtcagtg
gaagatcgcgcccgcgacatgctgtacccggagcagatttatcaggaattcgaaggcgac
accggcacctggtggaacttcgacccacgcgttgaatggctgatgggctacctgaccagc
caccgctcgcagaaagtgctggtgatctgcgccaaggctgcgacggcacttcagcttgag
caggttctgcgtgagcgcgaaggcatccgcgccgccgtcttccatgaaggcatgtccatc
atcgaacgcgatcgcgctgcagcctggtttgcggaagaagataccggcgctcaggtcctg
ctgtgctccgagattggctcagaaggccgtaacttccagttcgccagccagctggtgatg
tttgacctgccgtttaacccagacctgctggagcagcgtattggccgtctcgaccgtatt
ggccaggcgcacgacatccagatccacgttccgtacctggaaaaaaccgctcagtcggtc
ctggtggactggtaccacgcaggtctggacgccttcgagcatacctgcccgaccggccgc
accatttatgacagcgtctacccgcagctgatcgaatatcttgcggccccggaaaatacc
gaaggctttgacgcgctgatcaagcagtgccgcgagcagcacgatgcccttaagcagcag
cttgagcagggccgcgaccgtctgctggaaattcattccaacggcggtgagaaagcgcag
gcgctggcagaagccatttccgcgcaagataacgacactaacctcgttagctttgccatg
aacctgtttgatatcgtcggcattaaccaggacgatcgcggcgacaacatggtcgttatt
acgccgtccgaccatatgctggtcccggacttcccgggcctgccggaagacggctgcaca
atcaccttcgagcgtgacgtagccttgtcccgcgaagacgcgcagtttgtgacctgggaa
catccgatcatccgcaatggcctggatcttatcctgtccggcgataccggtagctgcgcc
ctgtctctgctgaaaaacaaagcactgccggtgggtacgctgctgctggagctggtgtac
gttgtcgaggctaaagcgccgaaacagctgcagctcaaccgcttcctgccgccgacgccg
gtgcgcatgctggtggataaaaacggtacgaacctcgcagcgcaggtggagtttgaaagt
ttcaaccgccagctcagcgcggttaaccgtcataccggcagcaagttggtgaatgcggtg
cagtccgacgtgcacgccattctgcaggtagcggaagagaaagttgccgatgcggcacag
gcgctgatcgacgcagctcgtgaagaagccgatgagaagctgagtgctgagctgtcccgt
ctggaagcgttaaaggccgttaaccctaacattcgtgacgacgagcttgtggctatcgaa
accaatcgccagcaggtgatggaagcgctgagccaggctaactggcgtcttgatgctctg
cgtttgattgttgtgacgcaccagtaa
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