Cedecea neteri ND14a: LH86_09210
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Entry
LH86_09210 CDS
T03337
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cen
Cedecea neteri ND14a
Pathway
cen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH86_09210 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cen03019
]
LH86_09210 (pcnB)
Enzymes [BR:
cen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LH86_09210 (pcnB)
Messenger RNA biogenesis [BR:
cen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LH86_09210 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AIR65259
LinkDB
All DBs
Position
complement(1928332..1929678)
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AA seq
448 aa
AA seq
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MVEETETLPHITVIPRDQHAISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKP
KDFDVTTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEEQQSADRQTS
QRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFSVRDYVGGLNDLNKGIIRLIGD
PETRYREDPVRMLRAVRFAAKLNMTISPETGEPIPRLATLLNDVPPARLFEESLKLLQAG
YGFETYQLLREYQLFQPLFPIITRYFTEQGDSPMERIIALVLKNTDTRIHNDMRVNPAFL
FAAMFWYPQLEMAQKIAQESGLAYYDAFALAMNEVLDEACRALAIPKRITTLVRDIWGLQ
LRLSRRQGKRAWKLMEHPKFRASYDLLALRAEVENNQELLRLTKWWGEFQVAAPPMQKDM
LNDLGDEPAARRRTRRPRKRAPRREGNS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaggagaccgaaactctcccgcacattactgttatcccgcgtgaccagcacgct
atttcccgcaaagatatcagtgaaaatgccctcaaggtgctctaccgtttaaacaaagca
ggctacgaggcctacctcgtcggcggcggcgttcgcgacctgctgctggggaaaaaaccg
aaagatttcgacgtcaccaccagcgcgacgccagaacaagtccgcaaactgttccgtaac
tgccgcctggttggccgccgtttccgcctggctcacgtgatgttcgggccagaaatcatc
gaagtggccaccttccgcggccatcatgaagagcagcagtctgccgaccgtcagacctcg
cagcgtggccagaacggcatgctgctgcgcgataacatctttggctctatcgaagaagat
gctcaacgccgcgacttcactatcaacagtctttactacagcgtggccgatttctccgtg
cgggattacgtcggcggcctgaacgatctgaacaaaggcattattcgcctgattggcgat
ccggaaacgcgctaccgcgaagatccggtgcgaatgctgcgcgccgtgcgctttgccgcc
aagctgaatatgaccatcagcccggaaaccggcgagccgatccctcgccttgccacgctg
ctgaacgatgtgcccccggcgcgtctgtttgaagagtcgctcaaacttctgcaggccgga
tacgggtttgaaacctaccagctgctgcgtgaatatcagctcttccagccgctgttcccg
attatcacccgctacttcaccgagcagggcgacagcccgatggagcgcattattgcgctg
gtgctgaagaacaccgatacccgcattcataacgatatgcgcgtaaatccggcgttcctt
tttgcggcgatgttctggtatccgcagttggaaatggcgcaaaaaatcgcccaggaaagc
ggcctcgcctactacgacgcctttgcgctggcaatgaatgaagtgctggatgaagcctgc
cgtgcgctggcgattccaaaacgtattactacgctggtgcgtgacatctggggcctgcag
cttcgtctgtcccgccgccagggtaaacgcgcctggaagctgatggagcatcctaagttc
cgggcgtcttacgatctgctggcgctgcgcgcggaagtcgagaacaaccaggaactgctg
cgtctgaccaaatggtggggcgagttccaggtagctgcgccgccaatgcaaaaagatatg
ctgaacgaccttggcgatgagcctgccgcacgccgccgtacccgtcgtccgcgcaaacgt
gcgccgcgccgcgaaggtaattcatga
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