Cedecea neteri ND14a: LH86_14675
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Entry
LH86_14675 CDS
T03337
Symbol
hmsH
Name
(GenBank) biofilm formation protein HmsH
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
cen
Cedecea neteri ND14a
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_2
TPR_9
Motif
Other DBs
NCBI-ProteinID:
AIR66290
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Position
3064258..3066699
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AA seq
813 aa
AA seq
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MEQRLSITKLFFYRGVKLSLFLIMPGLLPAQGMGAISRYDSQVLQARNGDYQPLLDALKH
EAQQKALNPEQVADWLQVTSWAGRDDEVVSVWQRYQERTAIPARGVAAAAQSLRNLHRWT
ESLSLWEEALRLSPGNDDYRMGQIKTLADGQKRWQAREEALRLVKEKPDLAHLQTLSYVY
LRQGKTWDQLLSDTRALALAPEDKIALQNLIASLTVNRVNTTALALANEAELPANERRSL
ELNALAEMVRMAEISPGEEKARFTVAQRALDRYDALFAQWRRDPQAQQDVTRARIDRLGA
LYAHNYYPKVIQEYEALASEYVHVPPWALRWVIASYLAEKQVENAQALTPQLFSGATNKN
EQAMFYALLDSGQYGSAGRYLQNLAQVTPYRRYVPGFPNPVPNDRWLEAKTLSLQYLVST
NALPEAQALSQRLASTAPGNQGLRIDYARVLQARGLPQAAERELKKAEVLEPSNLELERQ
QAYVAQDLHEWRQMDLLTDDVMLRAPLDIGSQRLKRTREIHQMSELRINGQQGIHSDTPV
SGAHDFSWDMAIYGPPVADNWRLFGGNRFNSGRFEEGKGFSRSVFGGVEWRPRNSWVELE
LANNNFNGGNKPGGRVSAWHSFSDSWRVGGEVERLARATPLRALRNGVSSNQANLWVRWH
QNERREYQLATTTSWFSDHNHRREYTFQGKERLWQTPRITLDLQPGVTYSTNSQTDTVYY
SPKWDLSAAPTLAVNHVMYQRYDTVWSQQISAGAGIYRQKNYGAGAMTTLGYGQRIQWNN
VLDTGAMLNWEKRPWDGKRETHFAVAFDANLRF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaggctgagtatcactaagttattcttttatcgtggcgtgaagctttcgtta
tttttaatcatgccgggattgctcccagcgcaagggatgggggcaatatcgcgctatgac
agccaggtattacaggcgcgaaacggagattatcaacccctgcttgatgccttaaaacat
gaggcacagcaaaaagcacttaacccggaacaggttgcagactggctgcaggtcacctcc
tgggcagggcgtgatgatgaggtagtcagcgtgtggcagcgttatcaggagcgcactgct
atcccggctcgtggcgtcgccgccgctgcacaatccctgcgtaatcttcatcgctggacg
gagtcactttctctctgggaagaagcgcttaggctttcacccggcaatgatgattatcgc
atggggcaaattaaaaccctggccgacggccaaaagcgctggcaggcgagggaagaggcg
ctgcgtctggtcaaggaaaagcctgacctcgcacatttacagacgctctcttatgtctat
ctgcggcagggaaaaacctgggatcagctgctaagcgacacgcgagcccttgcacttgcc
ccggaagataaaatcgctctgcaaaacctgatagccagcctgaccgtgaaccgggtgaat
accacggcgctggcgttagccaacgaagcggaacttccggcaaatgagcgcagaagtctg
gaacttaacgcgttggctgaaatggtgcgtatggccgaaatctctccgggagaggaaaaa
gcgcgctttaccgtcgcgcagcgggcgttggatcgttacgacgccttgttcgcccaatgg
cgtcgcgatccgcaggctcagcaggacgtcacgcgggcgcggatagaccggcttggcgcg
ctctatgcccacaattattacccaaaggtcattcaggaatatgaagccctggcctcagaa
tatgtgcatgtcccgccctgggctttacgttgggtgattgcttcttacctggcagaaaag
caggtagaaaacgcgcaggcgctaacgccgcagctgttcagcggcgcgacgaacaagaac
gagcaggcgatgttttatgccttgttggacagcggccagtacggctccgccggacgctat
ctgcaaaatcttgcccaggtaacgccttaccgccgctacgtgccgggcttcccgaacccc
gtcccgaacgatcgctggctggaagcaaaaacgctctccctgcagtacctcgtatcgacc
aatgcactcccggaagctcaagcgctatcccagcgtctggcgagtactgcgccggggaat
cagggattgcgtatcgattatgccagggttttgcaggcgcgcgggctgccgcaggcggct
gaacgagagcttaaaaaggcggaagtgcttgagccgtccaacctcgagcttgagcgacag
caggcctatgtcgcgcaggatctccacgagtggcggcaaatggatttgttgacggacgac
gtgatgctgcgtgccccgctggatatcggttctcagcgcttgaagcgaacgcgtgagatt
caccaaatgtccgaactgcgcattaacggtcagcaggggatccattctgatacgcccgtc
agcggcgcacacgactttagctgggatatggcgatttacggcccacccgtggccgacaac
tggcggctgtttggcggtaaccgttttaacagcgggcgttttgaagaaggtaagggcttc
agccgcagcgtgttcgggggcgttgaatggcggccgcgcaatagctgggtcgagcttgaa
ctggcgaacaacaacttcaacggcggcaataagccaggcgggcgcgtttcggcctggcac
agcttcagcgacagctggcgagtaggaggcgaagtggaacgcctggcacgggcaacgccg
ctgagagctttgcgcaacggggtaagttcgaatcaggccaacctgtgggtgcgctggcac
caaaacgaacggcgtgaatatcagctcgcgaccacgaccagctggttttcagaccataac
catcgtcgggaatataccttccagggcaaagagcggctgtggcaaacgccacggatcacg
ctcgacctgcagcccggcgtgacttacagcaccaacagccagacagacacggtgtattac
agcccgaaatgggatttatccgccgcgccgacgctcgccgttaatcacgtgatgtaccag
cgctatgacaccgtctggagccagcagatcagcgccggggcgggcatttaccggcaaaaa
aattacggggcgggagcgatgacaaccctgggatatggccagcgtatccagtggaacaac
gtcctcgacaccggggccatgctgaactgggaaaaacggccctgggacggcaagcgggaa
acgcatttcgccgtcgcttttgatgcgaatttacgattttaa
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