Cedecea neteri ND14a: LH86_17720
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Entry
LH86_17720 CDS
T03337
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cen03016
]
LH86_17720
Enzymes [BR:
cen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LH86_17720
Transfer RNA biogenesis [BR:
cen03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LH86_17720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIR66854
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All DBs
Position
complement(3741439..3742548)
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AA seq
369 aa
AA seq
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MITTDEGLAAVCQAARQFPALALDTEFVRTRTYYPQLGLIQLYDGQQVSLIDPLTISDWS
PFKALLQDPDTSKYLHAGSEDLEVFLNAFGMLPDPFIDTQILASFTGRPLSCGFATIVES
YTGIALDKSESRTDWLARPLTERQCEYAAADVLYLLPIAEKLMAETEAAGWINAALDECH
LMCSRRRDQLDPEEAWREIGNAWQLRTRQLACLKKLAAWRLRKARERDMAVNFVVREENL
WQVARYMPGSLGELDSLGLSGSEIRFHGKTLIALVAEAQALPESELPQPLQNLVDMPGYR
KVFKAIKALVQEVSEAKGLSAELLASRRQINQLLNWHWKLKPQNVMPELISGWRAELMAE
ALTKLLAEY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcactaccgatgaagggctggccgccgtttgccaggccgcccgtcaattccccgcg
ctggcgctggacaccgagtttgttcgtacccgtacctactaccctcaactgggacttatc
cagctttatgacggtcagcaggtttcgttgatcgatcctttaaccatcagcgactggtcg
cctttcaaagccttgctgcaggatccggatacaagcaaatatctgcacgcgggcagtgaa
gatctcgaagtcttcctgaatgcctttggcatgctgccagatccgtttattgatacgcag
attctggcgtccttcactggccgcccgctgtcttgcggctttgccaccattgttgagtcc
tacaccggcattgcgctggataaaagcgaatcccgtaccgactggctggcgcgtccgctc
accgagcggcagtgtgaatatgctgcggctgacgtactttatttgctgcctatcgctgag
aaactgatggccgaaacggaagcggcaggctggatcaacgcggctctcgatgagtgccat
ctgatgtgctcccgccgccgcgatcagcttgatccggaagaggcctggcgcgaaataggc
aacgcctggcagctgcgtacccgacagttggcctgcctcaagaagctggcggcctggcgc
ttgcgtaaagcccgcgagcgcgacatggcggtgaactttgtcgttcgcgaagaaaacctg
tggcaggtagcgagatacatgcccggctcgctgggcgaactggactcgcttggcctgagc
ggcagtgaaattcgcttccacggtaagacgcttatcgccctggtggccgaggcgcaggcg
ctgccggagagcgagctgccgcagccgctgcaaaacctggtggatatgccgggctaccgc
aaagtgtttaaggccattaaagccctggtgcaggaagtgagcgaggcaaaagggctgagc
gccgaattactggcctcccggcgccaaatcaatcagctgttaaactggcactggaaattg
aagccgcaaaacgtcatgccggaattaattagcggctggcgggcagaattaatggcagaa
gcgttaacgaaattgctggcggaatactga
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