Cedecea neteri ND14a: LH86_18950
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Entry
LH86_18950 CDS
T03337
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cen
Cedecea neteri ND14a
Pathway
cen03420
Nucleotide excision repair
cen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LH86_18950
03430 Mismatch repair
LH86_18950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cen03400
]
LH86_18950
Enzymes [BR:
cen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH86_18950
DNA repair and recombination proteins [BR:
cen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH86_18950
MMR (mismatch excision repair)
Other MMR factors
LH86_18950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SMI1_KNR4
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIR67080
LinkDB
All DBs
Position
3987618..3989480
Genome browser
AA seq
620 aa
AA seq
DB search
MNIEISERDINDVEQELNLSFDDARREIIQSYNDVQACPGSGKTTMVAAKLLIIAKKWMS
LHQGICVLTHTNVAKKEIIERLQTSIHGGKLLTSPHFIGTIQEFVNKFLAIPYLRSQGFK
ITHIDDEICCARGWGFLNRGTKNYLERNRIKSIQEMQYKFIDGCLDLNIPSFRRESQSNS
YQDLINAKNTLMTEGYFFYHEMYEISKDYIHHNPDIIKAIQSRFPIVFIDEMQDTQKFQD
EFLNTIFRNDNDQVKMQRFGDPDQAIYGTNEEENQTYNQAELEKVKNSHRFNSSIASIAR
NLSYNRINLTSEISHPNQSLHTIFLVDDSSRTNVFEHFANLCSQVVPINCEYPIKSVGAV
GKKSENSLTICSYYENFEKTDSTVGFKNTKLIQYIYVARQQNRNSESYRTILDGIIHFGR
VSNFQITMQDGSQSDISVANIKKHLKLSSLLVDFNLLAMSLMTNEISEETWGNSVTLLLS
YLGINISNRNHIFLSFERNLINEPHDSPTRNIISFEIEGRIIENQIATIHSVKGETHAAT
LLLETKYHTNDITTLIDYILLENITQPTEARKKKFMKQIYVALTRPKYLLCIAMNKSGFP
AEHISKHELAGWNICDLTQH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgaaattagtgaaagagacatcaacgatgtagagcaagagttaaacttgtca
tttgatgatgcaagacgcgaaataatacaatcatataatgatgtccaagcttgtcctggt
agcggcaaaacaacaatggtagcggctaagttgttaattatcgcaaaaaaatggatgagt
ttacatcaaggtatatgcgtcctaacgcatactaatgtagctaaaaaagaaattatagag
cgtctccaaacgagtatacatggtgggaaattgttaacttcaccacatttcatcggcact
attcaagaattcgttaataaatttcttgcaataccttatcttcgttctcaaggatttaaa
ataactcacatcgatgatgaaatatgttgtgcaagaggctggggttttcttaatagagga
acgaaaaattaccttgaaagaaataggataaaatccattcaagagatgcaatataaattt
atagatggatgccttgaccttaacatccctagtttccgtagagaatcacagtcgaacagt
tatcaagatttgataaatgctaaaaatacacttatgacagaaggttatttcttttatcac
gaaatgtatgaaatatcaaaagactatatacaccacaaccctgatattataaaagcaatt
caatctcgttttcctatcgtttttatcgacgaaatgcaagacacccaaaaatttcaagat
gaatttttaaatacaatctttcgaaatgataatgatcaagttaagatgcaacggtttggc
gatcctgaccaagctatttatgggactaatgaggaagagaaccaaacctataatcaagca
gagttagaaaaagtaaaaaatagtcatcgctttaatagctctatagcatcaattgctaga
aatctaagttataatcgcataaatttaacatcggaaatttctcatcccaatcaatcacta
catacaatatttcttgtcgatgatagttctcgcactaatgtatttgagcatttcgctaat
ttatgctcgcaagtagttccgattaactgtgaatacccaataaaatctgttggtgcagtt
ggtaaaaaaagtgaaaactctttaacgatttgcagttattatgagaattttgaaaaaact
gattctacagtaggattcaaaaacactaagttaattcaatatatatatgttgcccgccaa
caaaatcgtaacagtgaatcttaccgtacaatccttgatggaattattcatttcgggaga
gtatctaattttcagatcacaatgcaagatggttcacaatctgatatatcagtcgcaaac
ataaaaaaacaccttaaattatcttcacttttagttgattttaacttgttagcgatgtct
ttaatgacaaatgaaatatccgaagaaacttggggaaattccgtcaccttattattgtct
tacttaggtattaatatatctaaccgaaatcacatttttttatctttcgagcgtaatcta
ataaacgaaccccatgatagtccaactagaaatattatctcttttgaaattgaaggaaga
attatagagaatcaaattgcaacaattcattctgtaaaaggggagacgcatgctgcaact
ttacttctagaaacaaaatatcatactaatgatataacaaccttaattgactacattctt
ttagagaatataacacaaccgacagaagccagaaaaaagaaattcatgaagcaaatatat
gttgcactcacaagacctaaatacttattgtgtattgcaatgaataaatcaggatttccg
gccgagcatatttcaaagcatgaacttgcgggttggaatatttgcgatttaactcaacat
tga
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