Cedecea neteri ND14a: LH86_19940
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Entry
LH86_19940 CDS
T03337
Name
(GenBank) 16S rRNA pseudouridylate synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cen03009
]
LH86_19940
Enzymes [BR:
cen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LH86_19940
Ribosome biogenesis [BR:
cen03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LH86_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIR67273
LinkDB
All DBs
Position
complement(4211994..4212695)
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AA seq
233 aa
AA seq
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MRLDKFISQQLGISRAISGREIRANRVTIDGEVVRDASFKLLPEHQVAFDGNSLTQQHGP
RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAHKLHAAGRLDIDTTGLVLMTDDGQWSHR
ITSPRHHCEKTYLVTLESPVEEGTAEHFAKGVQLHNEKDLTKPAVLEVITPTEVRLTISE
GRYHQVKRMFAAVGNHVVGLHRERIGDIALDPELAPGEYRPLTEQEIASVGMP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgacaaatttatctctcagcagctcggcatcagccgcgctatttctggccgt
gaaatccgtgctaaccgcgtcaccattgacggggaagttgtgcgcgacgcctcttttaaa
ctgctgccggaacatcaggtcgcgtttgacggtaattcactgacccagcagcacggccct
cgctacttcatgctgaacaagccgcaggggtacgtctgttctaccgacgatcccgatcac
ccaacggtgctttacttcctcgacgagccggtggcgcacaagttacatgccgcgggccgt
ctggatattgacaccaccggcctggtactgatgacagacgacggccagtggtcacatcgc
attacctctccgcgccatcactgcgagaaaacctatctggtgacgctggaatcaccggtt
gaagaaggcacggcggaacacttcgccaaaggcgttcaactgcataatgaaaaagacctc
accaaacctgccgtgctggaagtgattacgccgacggaagtgcgtctgaccatcagcgaa
ggccgctaccatcaggtaaagcgcatgtttgccgccgttggcaatcatgtggttggcctg
caccgtgagcgcattggcgacatcgccctggatcctgaactggcgccaggagagtaccgc
ccgttaaccgaacaggaaattgccagcgtcggcatgccctaa
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