Coxiella endosymbiont of Amblyomma sculptum: EGQ50_01210
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Entry
EGQ50_01210 CDS
T06434
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cend
Coxiella endosymbiont of Amblyomma sculptum
Brite
KEGG Orthology (KO) [BR:
cend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cend03032
]
EGQ50_01210 (topA)
03400 DNA repair and recombination proteins [BR:
cend03400
]
EGQ50_01210 (topA)
Enzymes [BR:
cend01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EGQ50_01210 (topA)
DNA replication proteins [BR:
cend03032
]
Prokaryotic type
DNA Topoisomerases
EGQ50_01210 (topA)
DNA repair and recombination proteins [BR:
cend03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EGQ50_01210 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Phage_zn_bind_2
DUF5795
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHG92387
UniProt:
A0A6P1LPR2
LinkDB
All DBs
Position
complement(249386..251695)
Genome browser
AA seq
769 aa
AA seq
DB search
MTIQSLVVVESPTKAKTIAQYLGKDFRVMSSYGHVRDLIPKKGVDPSNNFKMYYQEIERN
SCYMQAIEKVLQHCENFFIATDPDREGEAIAWHIKQVLDTKNVLKNKKFSRIAFHQITKE
AIQKAMKSPREILMDLVNAQQARRALDYLVGFNLSPLLWLKIRPGLSAGRVQSPALRMIV
EREIEIENFKSQQYWTLHAYFRFQKQNFDAQLIEFQNRKIKKFSIVLEKEMQDVSRNIEK
SSNGRLTVNKIIKKKRKRSPPPPFITSTMQQESIRKLGFSASKAMKISQELYEGIEIENE
GAIGLITYIRTDSVTLSPESIETIREFIRKKYGQKNLPKEARIYKNQSKNAQEAHEAIRP
TSIFRLPENLQKYLTNDQLKLYALIWKRTVACQMIDTILYTIAVDLVASGICFRSSHSTT
AESGYITVYRETDSSEVSDSERRYKILSSLKEKQAVAISSFKSTQHFTEPTSRYTEASLI
KELGKYDIGRPSTYTNIISVLKNRKYVEMSDRKYFVATDMGRVVNQFLTHYFTKYTDYKF
TAKLEDALDSISRGEKSWTSVLENFWFPFKNLVDVVNSTVKRSDVVEEKIDRKCPKCESQ
LSIRLGKQGRFIGCTAYPSCSYTLNVENTAVSSSKQLIEKDRQCPECQSNLVIKIGRYGK
FIGCCNYPNCRYIESLEKPKDTKIICPKCNEGTLLQRKSRQGKMFYSCTKYPNCNYTIWN
APLSQECPICHWPILLIKKTKTRGVEEVCAQKNCNFSKPYFAKKEKFFG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacgatacaatctttagtagtagtcgaatcgcctactaaagccaagacaatagcccaa
tatttgggtaaagacttcagagtaatgtcttcttatggacatgttcgcgatctaattcct
aagaaaggcgtagatccatccaataattttaaaatgtattatcaagaaatagaacgaaac
agttgctatatgcaagctatcgaaaaagttttacaacattgtgaaaattttttcatagcc
acagatccggatcgtgaaggtgaagcgatcgcttggcacataaaacaagtattggatact
aaaaatgttctaaaaaacaaaaaattttcccgaattgcatttcatcaaattaccaaagaa
gccatacaaaaagctatgaaaagtccgcgtgaaatcctgatggatttagtaaacgcacaa
caagcgcgacgtgcattggactatttggttggttttaacttgtctccgttattatggtta
aaaattcgaccaggactttctgcaggtcgcgtacaaagccctgcattacgtatgattgta
gaaagagaaattgaaattgaaaatttcaaaagtcaacaatattggactctacatgcgtat
tttcggtttcagaaacaaaattttgatgcccaattaattgagttccaaaacagaaagatt
aagaaattttctatagttctagaaaaagaaatgcaagatgtttccagaaatatcgaaaaa
tcttccaatggaagacttacagtcaacaagatcatcaagaaaaaacgtaaacgcagtcct
cctccgcctttcatcacttctacaatgcagcaagaatctatacgaaaattaggattttcc
gcttctaaggctatgaaaatctctcaagaattgtacgaaggtattgaaattgaaaatgaa
ggcgcaataggtctcattacttatattcgtacagattccgtcacattatctccggaatct
atagaaacaattcgagaatttattcgtaaaaaatatggacaaaaaaatttaccaaaagaa
gcacgtatctataaaaatcaatctaagaatgctcaagaagcacatgaggctattcgaccc
acttcaatttttcgacttcccgaaaatttacaaaaatatctaacaaacgaccaattgaaa
ttatacgccttaatttggaaacgaacagttgcttgccaaatgatcgacactattttatat
acaattgctgttgatctggtggcgtccggcatttgttttcgttccagccattccactacg
gccgaatcaggttacatcaccgtttatagagaaactgacagtagtgaagtatcagacagc
gaaaggagatacaaaatattgtcctctttgaaagagaaacaagctgttgccattagtagt
tttaaaagtacacaacactttaccgaacctacgtctcggtatactgaagcgagtttgatt
aaggaactgggaaaatatgatattggacgtccttctacttacacaaatattatttctgta
ttgaaaaatcgcaagtatgttgaaatgagcgacagaaaatacttcgttgccacagatatg
ggccgcgttgttaatcaatttttgactcattacttcaccaaatatacagactataagttc
acagcaaaattagaagacgcattggatagtatttctcgaggagagaaatcttggacttca
gtattggaaaacttttggtttcctttcaaaaaccttgttgatgttgttaacagtactgtt
aaacgtagcgatgtagtagaagaaaaaattgatagaaaatgtcctaaatgcgaatcccaa
ttatctattcgactaggtaaacaggggcgtttcatcggatgcactgcctatcctagttgt
agttacactctcaatgtagagaatactgctgtaagttcttcaaaacaactcatcgaaaaa
gatcggcaatgtccggaatgccaatctaatcttgtcatcaaaatcggacgttacggaaaa
tttattggttgctgcaattatccgaattgtcgctacatagaatcgttggaaaaacccaaa
gatacaaaaattatctgtcccaaatgcaacgaaggtactcttttacaacgaaagtctcgt
caaggaaaaatgttttattcatgtaccaaatatccaaattgcaactatacaatttggaat
gcgccactctctcaagagtgtcctatatgccattggcctatcttgttgataaaaaaaacg
aaaactcgaggagtagaagaagtatgcgcccaaaaaaattgcaatttttcgaaaccttat
tttgcaaaaaaggagaaatttttcggatga
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