Coxiella endosymbiont of Amblyomma sculptum: EGQ50_02675
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Entry
EGQ50_02675 CDS
T06434
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cend
Coxiella endosymbiont of Amblyomma sculptum
Pathway
cend03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cend00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EGQ50_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cend03019
]
EGQ50_02675
03009 Ribosome biogenesis [BR:
cend03009
]
EGQ50_02675
Messenger RNA biogenesis [BR:
cend03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EGQ50_02675
Ribosome biogenesis [BR:
cend03009
]
Eukaryotic type
Pre-60S particles
RNases
EGQ50_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PP_kinase_N
DUF8174
Motif
Other DBs
NCBI-ProteinID:
QHG92736
LinkDB
All DBs
Position
552972..553520
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AA seq
182 aa
AA seq
DB search
MIFHKNNFVWLDLEMTGLNPKEDRILEIATIVTSNDLDCIADGPVLAIHQTTELLERMDH
WNVSHHTDSGLLDRVRNSSCTESLAEKKTLDFLKKYVPAGISPLCGNSVCQDRRFLCLYM
PNLNQFFHYRHLDVTTLKILAQYWTPQIMTDAVKKSSQHTALKDIQNSIKELRYYRKHLL
KM
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgattttccataaaaataactttgtctggctcgatctggagatgacaggattgaatcca
aaagaagatcgtattcttgaaattgcaacgatagtaactagtaatgatcttgattgtatt
gcggatggccctgttcttgctattcatcaaactactgaattgttagaaaggatggaccat
tggaatgtttctcatcatactgattctggtttattggatcgagtcagaaacagcagttgt
actgaaagtttagccgagaaaaaaactctagattttcttaaaaaatatgttccggctgga
atatcgcctttatgtggtaattctgtttgtcaagaccgacgatttttgtgtctctatatg
cccaatctgaatcaattctttcattatcgacatttagacgtaacaactttgaaaattctc
gctcaatactggactcctcagataatgacggatgctgttaaaaaatcatcgcaacacaca
gctcttaaagatatacagaattccataaaggaattgcgttattatcgaaaacaccttttg
aagatgtga
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