Coxiella endosymbiont of Amblyomma sculptum: EGQ50_02855
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Entry
EGQ50_02855 CDS
T06434
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cend
Coxiella endosymbiont of Amblyomma sculptum
Pathway
cend03410
Base excision repair
cend03430
Mismatch repair
cend03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cend00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EGQ50_02855 (recJ)
03430 Mismatch repair
EGQ50_02855 (recJ)
03440 Homologous recombination
EGQ50_02855 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cend03400
]
EGQ50_02855 (recJ)
DNA repair and recombination proteins [BR:
cend03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EGQ50_02855 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EGQ50_02855 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EGQ50_02855 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QHG92637
LinkDB
All DBs
Position
complement(594035..595768)
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AA seq
577 aa
AA seq
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MNKEIIRRKVLKLNKNLTHLHPVLQRIYLARNISSPEELSRELRSLLSFSLLSGITQATK
RLMLALKKQQNTVVIGDFDTDGATSTALMIRALREFGMKNISYLIPNRFTCGYGLTTKIV
EIASAKRPNLIVTVDNGISSYPGVVKANQLGIDVLITDHHLPNDPLPPACAIVNPNCKED
AFPSKCLSGVGVSFYLMLALRAELKKNNWFDRCGLHYPNMAKFLDFVALGTIADVVPLDK
NNRILVYQGLQRIRAGKAHEGVLALLEVSGRKRERLRTSDLGFSIGPRLNAAGRLEDMSL
GVDCLLADNKKTALYIAHRLDNLNQKRRVIASRMQKEAFSFIDRFDTNQPPPPGVCLYRE
EWHQGIIGLIASQVRERIHRPTIAFSKIHDNMLQGSARSVSGLHICNILETISIRNPELI
KKFGGHAMAAGLSISLDRYTEFQQAFSEEVNRCFGEKNLRPKLITDGTLTSKELTLEFAE
LIEQAEPWGQGFPEPTFDGYFKLINQKIIRQQHLKLILQISKMEHYLEGFVFHINAKERP
DLRCRYVRLVYRLNVNEFRGRKKLQLLVDYIQPIIHK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaagaaattattcgacgtaaagtattaaagttaaataaaaatcttacacattta
catccagttcttcagcgtatttatctggcaagaaatattagttcacctgaagaactgtcc
cgagaactaagaagcttactatccttttctttgctatccggtattactcaagcaacaaaa
agattaatgcttgctttaaagaaacaacaaaatactgtagtcattggagattttgataca
gacggcgctacgagtaccgctttgatgataagagcattgcgtgaatttggaatgaaaaat
atttcttatttaattcctaatcgatttacttgtggttatggattaacaacaaaaattgta
gaaatagcttccgctaaacgtcccaatttaatcgtcacagtcgacaacggaatttccagt
tatccaggagtagtgaaagcaaatcaactaggaatcgatgtattgattacagatcaccat
ttacccaacgatccattacctcccgcttgcgctattgtaaatcccaattgtaaagaggat
gcatttcccagcaaatgtttatccggtgtgggagtgtctttttatctcatgttggcattg
cgtgcagaattaaaaaaaaataattggttcgatcggtgtggactacactatcccaatatg
gcaaagttcttagattttgtcgctcttggtacaatagccgatgttgtcccactagacaaa
aacaaccgtatactagtatatcaaggattgcaacgtattcgagcaggaaaagctcatgaa
ggagtactggcactattagaagtatccggacgtaaacgagaacgattacggacttctgat
ctcggtttttctattggtccacgattaaatgcagcaggacgtttggaagatatgagttta
ggtgtcgattgtttattagcagacaataaaaaaacggctttatacattgcccatcgatta
gacaatttgaatcaaaagaggcgtgttattgcgtctcgaatgcaaaaagaggcattcagt
tttatcgatcgattcgatacgaatcaaccaccaccccccggggtttgtttgtatcgagaa
gaatggcaccaaggtataataggattaatcgcctctcaagtaagagagcgtatacaccga
cctaccattgcgttctcaaaaatacacgataacatgttacaaggatctgctcgatctgtt
tccgggctacacatctgtaacatattagagacgatttccatcagaaatccggaattaata
aagaaatttggagggcatgctatggcagcaggtcttagtatatctttagatcgatataca
gaatttcaacaagcattttctgaagaagtcaacagatgttttggagaaaaaaacttacga
ccgaaactgataactgatggaacattaacttcaaaggaattaactcttgagtttgctgaa
ttaatagaacaagctgagccttggggacaaggatttcctgaacccacatttgatgggtat
ttcaaattgattaatcaaaaaattattcgtcaacagcatttgaaattgattttacaaatt
tctaaaatggagcattatttggaggggtttgtatttcatatcaatgcgaaggaaaggcct
gacttacgctgtaggtatgttcgcttggtctatcgattaaatgtcaatgaatttcgagga
cgtaagaaattacaacttttggtagattacatccaacccataatccataaataa
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